RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 C17orf80Q9BSJ5 609 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 GRIP2Q9C0E4 1043 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 INTS7Q9NVH2 962 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 AFF4Q9UHB7 1163 aaKnown RBP13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 ZMYM5Q9UJ78 669 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 NDUFAF1Q9Y375 327 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 ZNF711Q9Y462 761 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 GPR45Q9Y5Y3 372 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 CPQQ9Y646 472 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 COMMD10Q9Y6G5 202 aa13.94□□□□□ -0.18
PCDHGA3-202ENST00000612467 E2F3O00716 465 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 AKAP10O43572 662 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SNX2O60749 519 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 CLDN7O95471 211 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 IL2P60568 153 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SLC44A4Q53GD3 710 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 MBOAT1Q6ZNC8 495 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 ZSWIM9Q86XI8 627 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 ADCY4Q8NFM4 1077 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 GPATCH1Q9BRR8 931 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 TMEM175Q9BSA9 504 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 ADGRE3Q9BY15 652 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 POPDC3Q9HBV1 291 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SLC52A3Q9NQ40 469 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 TCRBV3S1A0A5B6 114 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SOCS2O14508 198 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SNUPNO95149 360 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 TRIM16O95361 564 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 GSTT1P30711 240 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 CLCN7P51798 805 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 CDH18Q13634 790 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 BTG3Q14201 252 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SAMD4BQ5PRF9 694 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 RFLNAQ6ZTI6 216 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 TSPAN33Q86UF1 283 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 MARVELD2Q8N4S9 558 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 C2orf15Q8WU43 125 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 NMD3Q96D46 503 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SPATA16Q9BXB7 569 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 CIPCQ9C0C6 399 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 NSUN3Q9H649 340 aaKnown RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 SDR39U1Q9NRG7 319 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 IL17CQ9P0M4 197 aa13.93□□□□□ -0.18
PCDHGA3-202ENST00000612467 DENRO43583 198 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 CYBBP04839 570 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 GGT5P36269 586 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 CTSOP43234 321 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 PSMD8P48556 350 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ACADVLP49748 655 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 STK19P49842 368 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 LAMB3Q13751 1172 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 DEFB115Q30KQ5 88 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ARMC12Q5T9G4 340 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 SLC2A7Q6PXP3 512 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 FAM43BQ6ZT52 329 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ZNF296Q8WUU4 475 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 LRRC58Q96CX6 371 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 RNF11Q9Y3C5 154 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ARHGAP10A1A4S6 786 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 GAPDHSO14556 408 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 FFAR3O14843 346 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 GPR42O15529 346 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 GREM1O60565 184 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ABLIM3O94929 683 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 PRAMEF1O95521 474 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ESRRBO95718 433 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 EFEMP2O95967 443 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 TFAP2AP05549 437 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 PYGLP06737 847 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 CAPN1P07384 714 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 HSPA7P48741 367 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 TTPAP49638 278 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 ATP6V0D1P61421 351 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 SMARCB1Q12824 385 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 NFYCQ13952 458 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 IKBKEQ14164 716 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 BLOC1S3Q6QNY0 202 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 Q6ZSR9 355 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 SERPINA9Q86WD7 417 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 HS6ST3Q8IZP7 471 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 FNDC5Q8NAU1 212 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 DDI1Q8WTU0 396 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 OR51B4Q9Y5P0 310 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 C1orf232A0A0U1RR37 186 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 RSL1D1O76021 490 aaKnown RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 DGKQP52824 942 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 DEFB103AP81534 67 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 SLC30A9Q6PML9 568 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 GPRIN3Q6ZVF9 776 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 CHST9Q7L1S5 443 aa13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 RALGPS2Q86X27 583 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA3-202ENST00000612467 NKAPQ8N5F7 415 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms