RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 C2orf54Q08AI8 447 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 COL9A3Q14050 684 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MORF4L2Q15014 288 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 CHRNA6Q15825 494 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 GAB4Q2WGN9 574 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ESRP1Q6NXG1 681 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 RAD9BQ6WBX8 426 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC24A5Q71RS6 500 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MTSS1LQ765P7 747 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC51AQ86UW1 340 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 LRRC6Q86X45 466 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SNX31Q8N9S9 440 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 PSD4Q8NDX1 1056 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC26A7Q8TE54 656 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SMG7Q92540 1137 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 NT5C3BQ969T7 300 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 DACT3Q96B18 629 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 PHF21BQ96EK2 531 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 OSBPL8Q9BZF1 889 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MUC13Q9H3R2 512 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 RMND5AQ9H871 391 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF275Q9NSD4 429 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC38A7Q9NVC3 462 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 DNAJB12Q9NXW2 375 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 RGPD8O14715 1765 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ARHGEF35A5YM69 484 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 DCLK1O15075 740 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 KLK10O43240 276 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 OPHN1O60890 802 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MED24O75448 989 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SUN1O94901 812 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ZBTB11O95625 1053 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 CHRM5P08912 532 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM157BP0CG42 384 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SFNP31947 248 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MAGEA11P43364 429 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 GATA4P43694 442 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ERFP50548 548 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 NDUFA8P51970 172 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 AP2S1P53680 142 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 NUP107P57740 925 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 EEF1A1P68104 462 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 EEF1A2Q05639 463 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 GIT2Q14161 759 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 C16orf72Q14CZ0 275 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 EEF1A1P5Q5VTE0 462 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 OR6B2Q6IFH4 312 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 RINT1Q6NUQ1 792 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 KCNK18Q7Z418 384 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 PM20D2Q8IYS1 436 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ASCC1Q8N9N2 400 aaKnown RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 LEMD2Q8NC56 503 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC17A8Q8NDX2 589 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDH19Q8TAB3 1148 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ACTRT2Q8TDY3 377 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 CKAP2Q8WWK9 683 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 PGM2Q96G03 612 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 ORAI2Q96SN7 254 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MLPHQ9BV36 600 aaPredicted RBP4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 HIPK3Q9H422 1215 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 POLD4Q9HCU8 107 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 TUFT1Q9NNX1 390 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 VPS4AQ9UN37 437 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 MYH1P12882 1939 aa4.99□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A1W2PP64 1363 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 C5P01031 1676 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR91A4D1P6 747 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SMIM23A6NLE4 172 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ST8SIA3O43173 380 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TLX3O43711 291 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NUDT21O43809 227 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SNX3O60493 162 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 OR6B1O95007 311 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 OTCP00480 354 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 IL1BP01584 269 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TK1P04183 234 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 UROSP10746 265 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RALBP11234 206 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CYP3A5P20815 502 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 LRPAP1P30533 357 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 PIK3CGP48736 1102 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 BCAT1P54687 386 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 EPHB3P54753 998 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NLRP11P59045 1033 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SKP1P63208 163 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 OCA2Q04671 838 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 PRKCQQ04759 706 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RAD51Q06609 339 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CBFBQ13951 182 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TOB2Q14106 344 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 GRM4Q14833 912 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NFIXQ14938 502 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 LARS2Q15031 903 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RRS1Q15050 365 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NECTIN1Q15223 517 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF829Q3KNS6 432 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 BCL7AQ4VC05 210 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 VWA5B1Q5TIE3 1220 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TIGD7Q6NT04 549 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms