RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 INAVAQ3KP66 663 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 MORN1Q5T089 497 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 RANBP10Q6VN20 620 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 DTWD1Q8N5C7 304 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 FRS2Q8WU20 508 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 SARS2Q9NP81 518 aaKnown RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 SDR39U1Q9NRG7 319 aaPredicted RBP18.19■□□□□ 0.5
UPF1-210ENST00000600689 LIMD1Q9UGP4 676 aa18.19■□□□□ 0.5
UPF1-210ENST00000600689 A0A1W2PP18 115 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 PAGE1O75459 146 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 CAPN15O75808 1086 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 ZNF24P17028 368 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 IL12AP29459 219 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 TSNQ15631 228 aaKnown RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 KCNJ8Q15842 424 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 C14orf80Q86SX3 495 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 RBM23Q86U06 439 aaKnown RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 ZDHHC13Q8IUH4 622 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 OR13C4Q8NGS5 318 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 PSMA8Q8TAA3 256 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 FCRL2Q96LA5 508 aaPredicted RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 SENP8Q96LD8 212 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 ABCB10Q9NRK6 738 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 RNF112Q9ULX5 631 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 PDE10AQ9Y233 779 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 PSMD3O43242 534 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 SLC22A3O75751 556 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 CPNE6O95741 557 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 HTR1AP08908 422 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 GJA8P48165 433 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 FSCN1Q16658 493 aaKnown RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 DPY19L1Q2PZI1 675 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 ADCK1Q86TW2 530 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 PHYKPLQ8IUZ5 450 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 ELMO1Q92556 727 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 SLC9A7Q96T83 725 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 C17orf80Q9BSJ5 609 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 NOL6Q9H6R4 1146 aaKnown RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 CARS2Q9HA77 564 aaKnown RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 POLR3BQ9NW08 1133 aaPredicted RBP18.18■□□□□ 0.5
UPF1-210ENST00000600689 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
UPF1-210ENST00000600689 TRIM64A6NGJ6 449 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GSTA4O15217 222 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 S1PR4O95977 384 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CD1DP15813 335 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 FMO3P31513 532 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 POLR2JP52435 117 aaKnown RBP18.17■□□□□ 0.5
UPF1-210ENST00000600689 IL5RAQ01344 420 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CD47Q08722 323 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 SLC10A7Q0GE19 358 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CST9Q5W186 159 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 USP51Q70EK9 711 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 BNIPLQ7Z465 357 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 NANOGNBQ7Z5D8 188 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 SLC22A16Q86VW1 577 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 B3GALT6Q96L58 329 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 ZNF347Q96SE7 839 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 RHNO1Q9BSD3 238 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 MARCH7Q9H992 704 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GALPQ9UBC7 116 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 IKZF3Q9UKT9 509 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CASTOR2A6NHX0 329 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 G3V2T6 193 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 AP3B1O00203 1094 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CDC7O00311 574 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 ITGB6P18564 788 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CCNCP24863 283 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 PSMB9P28065 219 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 FMO4P31512 558 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 ADRA1AP35348 466 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 LEPRP48357 1165 aaKnown RBP18.17■□□□□ 0.5
UPF1-210ENST00000600689 CHRNB3Q05901 458 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 TRIM32Q13049 653 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 KCNAB2Q13303 367 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GALNT3Q14435 633 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 ZNF846Q147U1 533 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 ZNF549Q6P9A3 640 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 FBXO39Q8N4B4 442 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 OR7A2PQ8NGA2 310 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 THUMPD3Q9BV44 507 aaKnown RBP18.17■□□□□ 0.5
UPF1-210ENST00000600689 RRAGCQ9HB90 399 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 SPC25Q9HBM1 224 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 HMG20AQ9NP66 347 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GPR45Q9Y5Y3 372 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 MYADML2A6NDP7 307 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 MATN3O15232 486 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 TBC1D4O60343 1298 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 SNX2O60749 519 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 DEAF1O75398 565 aaPredicted RBP18.17■□□□□ 0.5
UPF1-210ENST00000600689 KATNA1O75449 491 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 CST1P01037 141 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 IDO1P14902 403 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 PIK3CGP48736 1102 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 SCAPQ12770 1279 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GRSF1Q12849 480 aaKnown RBP eCLIP18.17■□□□□ 0.5
UPF1-210ENST00000600689 OXA1LQ15070 435 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 GTF2IRD2BQ6EKJ0 949 aa18.17■□□□□ 0.5
UPF1-210ENST00000600689 SMYD5Q6GMV2 418 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms