RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TRAPPC5Q8IUR0 188 aa15□□□□□ -0.01
LIG1-219ENST00000600055 KLHL7Q8IXQ5 586 aa15□□□□□ -0.01
LIG1-219ENST00000600055 GALNT15Q8N3T1 639 aa15□□□□□ -0.01
LIG1-219ENST00000600055 ARL14Q8N4G2 192 aa15□□□□□ -0.01
LIG1-219ENST00000600055 OR13J1Q8NGT2 312 aa15□□□□□ -0.01
LIG1-219ENST00000600055 GRK7Q8WTQ7 553 aa15□□□□□ -0.01
LIG1-219ENST00000600055 CPT1BQ92523 772 aa15□□□□□ -0.01
LIG1-219ENST00000600055 NAT6Q93015 286 aa15□□□□□ -0.01
LIG1-219ENST00000600055 RANBP9Q96S59 729 aa15□□□□□ -0.01
LIG1-219ENST00000600055 ABCG4Q9H172 646 aa15□□□□□ -0.01
LIG1-219ENST00000600055 OSGEPL1Q9H4B0 414 aa15□□□□□ -0.01
LIG1-219ENST00000600055 LRIT1Q9P2V4 623 aa15□□□□□ -0.01
LIG1-219ENST00000600055 MSRB2Q9Y3D2 182 aa15□□□□□ -0.01
LIG1-219ENST00000600055 TCAF1Q9Y4C2 921 aa15□□□□□ -0.01
LIG1-219ENST00000600055 CCDC162PA2VCL2 907 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 AVILO75366 819 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 TMEM63AO94886 807 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 MT-CO3P00414 261 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 JUPP14923 745 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 GLB1P16278 677 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 MGAT1P26572 445 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 CASQ1P31415 396 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 PTGIRP43119 386 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 MAGEA6P43360 314 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 ETF1P62495 437 aaKnown RBP14.99□□□□□ -0.01
LIG1-219ENST00000600055 CCL7P80098 99 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 TARDBPQ13148 414 aaKnown RBP eCLIP14.99□□□□□ -0.01
LIG1-219ENST00000600055 LRRC8BQ6P9F7 803 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 TAS2R42Q7RTR8 314 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 SERPINA9Q86WD7 417 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 PIANPQ8IYJ0 282 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 NXPE1Q8N323 547 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 BEND7Q8N7W2 519 aaPredicted RBP14.99□□□□□ -0.01
LIG1-219ENST00000600055 Q8N9G6 341 aaPredicted RBP14.99□□□□□ -0.01
LIG1-219ENST00000600055 HDAC10Q969S8 669 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 ULK4Q96C45 1275 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 SGF29Q96ES7 293 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 ZCCHC2Q9C0B9 1178 aaKnown RBP14.99□□□□□ -0.01
LIG1-219ENST00000600055 SYNDIG1Q9H7V2 258 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 PRDM8Q9NQV8 689 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 CHRAC1Q9NRG0 131 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 SYBUQ9NX95 663 aa14.99□□□□□ -0.01
LIG1-219ENST00000600055 TRBV5-4A0A0C4DH59 114 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 A6NCN8 305 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 PRR19A6NJB7 356 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 GOLGA8MH3BSY2 632 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 SGTAO43765 313 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 POP7O75817 140 aaKnown RBP14.98□□□□□ -0.01
LIG1-219ENST00000600055 ACRV1P26436 265 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 PBLDP30039 288 aaPredicted RBP14.98□□□□□ -0.01
LIG1-219ENST00000600055 NPY2RP49146 381 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 CLCNKAP51800 687 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 CDK16Q00536 496 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 CACNG1Q06432 222 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 PPP1R7Q15435 360 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 PCID2Q5JVF3 399 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 FNBP1LQ5T0N5 605 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 CDCP2Q5VXM1 449 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 CAND1Q86VP6 1230 aaKnown RBP14.98□□□□□ -0.01
LIG1-219ENST00000600055 PPHLN1Q8NEY8 458 aaKnown RBP14.98□□□□□ -0.01
LIG1-219ENST00000600055 OR6C4Q8NGE1 309 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 SLC37A2Q8TED4 501 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 TIMM29Q9BSF4 260 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 BFARQ9NZS9 450 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 SCHIP1Q9P0W5 487 aaPredicted RBP14.98□□□□□ -0.01
LIG1-219ENST00000600055 PCYOX1Q9UHG3 505 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 CLCA2Q9UQC9 943 aa14.98□□□□□ -0.01
LIG1-219ENST00000600055 ZNF106Q9H2Y7 1883 aaKnown RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 A0A1W2PQM1 296 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 C1QTNF9BB2RNN3 333 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 PPM1DO15297 605 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 NUDT21O43809 227 aaKnown RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 GOT2P00505 430 aaKnown RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 C1QTNF9P0C862 333 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 NMBRP28336 390 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 FOXN2P32314 431 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 PAFAH1B1P43034 410 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 ACVR1Q04771 509 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 LAMB3Q13751 1172 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 SEPT7Q16181 437 aaKnown RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 DBN1Q16643 649 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 GPR33Q49SQ1 333 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 IYDQ6PHW0 289 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 CES3Q6UWW8 571 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 FAM83HQ6ZRV2 1179 aaPredicted RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 MPP5Q8N3R9 675 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 SFRP1Q8N474 314 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 GATA6Q92908 595 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 DCUN1D1Q96GG9 259 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 COPS8Q99627 209 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 TMEM121BQ9BXQ6 578 aaPredicted RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 IL22Q9GZX6 179 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 ZDHHC3Q9NYG2 299 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.97□□□□□ -0.01
LIG1-219ENST00000600055 RIMKLBQ9ULI2 386 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 PLXNB3Q9ULL4 1909 aa14.97□□□□□ -0.01
LIG1-219ENST00000600055 PTPRBP23467 1997 aa14.96□□□□□ -0.01
LIG1-219ENST00000600055 RHPN2P1A8MT19 583 aa14.96□□□□□ -0.01
LIG1-219ENST00000600055 NTN3O00634 580 aaPredicted RBP14.96□□□□□ -0.01
LIG1-219ENST00000600055 B4GAT1O43505 415 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms