RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GLIS2Q9BZE0 524 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 PLEKHA4Q9H4M7 779 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 C6orf106Q9H6K1 298 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 DDX4Q9NQI0 724 aaKnown RBP4.93□□□□□ -1.62
SMAD4-216ENST00000593223 SLC6A13Q9NSD5 602 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 HAO1Q9UJM8 370 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 BLOC1S6Q9UL45 172 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 UTYO14607 1347 aa4.93□□□□□ -1.62
SMAD4-216ENST00000593223 TMEM202A6NGA9 273 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 TPPPO94811 219 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 APOA4P06727 396 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 CCDC175P0C221 793 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 KRT10P13645 584 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 AKR1B1P15121 316 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ITGB6P18564 788 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SSTR2P30874 369 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 HNRNPH1P31943 449 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 CD151P48509 253 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 PDLIM4P50479 330 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 DRG2P55039 364 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 CSE1LP55060 971 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SH3BGRP55822 239 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SEC61A1P61619 476 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 COX10Q12887 443 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 CDC16Q13042 620 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 MYBPHQ13203 477 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 DCTN2Q13561 401 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 NAE1Q13564 534 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 DHX34Q14147 1143 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 TSTQ16762 297 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 COL28A1Q2UY09 1125 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ODF2Q5BJF6 829 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ZNF324BQ6AW86 544 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SLC30A6Q6NXT4 461 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ADHFE1Q8IWW8 467 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 PGBD5Q8N414 524 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 CARNMT1Q8N4J0 409 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 CCDC191Q8NCU4 936 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 MGARPQ8TDB4 240 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 KCNG4Q8TDN1 519 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 GIMAP1Q8WWP7 306 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SLITRK1Q96PX8 696 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 PIP5K1AQ99755 562 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SDF4Q9BRK5 362 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 TKTL2Q9H0I9 626 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 VPS33BQ9H267 617 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 NDST4Q9H3R1 872 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 KIF9Q9HAQ2 790 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 BRF2Q9HAW0 419 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 TRPV4Q9HBA0 871 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 PLSCR4Q9NRQ2 329 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 OLA1Q9NTK5 396 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SLC9A2Q9UBY0 812 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 GTF3C4Q9UKN8 822 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 MKLN1Q9UL63 735 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ERVK-11Q9UQG0 969 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ATP6V0A2Q9Y487 856 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 COL6A3P12111 3177 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ATP7BP35670 1465 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 SOS1Q07889 1333 aaPredicted RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ATXN2Q99700 1313 aaKnown RBP4.92□□□□□ -1.62
SMAD4-216ENST00000593223 KDM3AQ9Y4C1 1321 aa4.92□□□□□ -1.62
SMAD4-216ENST00000593223 ARHGEF10O15013 1369 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 KIF15Q9NS87 1388 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 HFM1A2PYH4 1435 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 VIRMAQ69YN4 1812 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 SYNJ2BP-COX16A0A087WUM0 186 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CLEC18AA5D8T8 446 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 C4orf47A7E2U8 309 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 GTPBP1O00178 669 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 RTCAO00442 366 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 PLOD2O00469 737 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ACOT8O14734 319 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 WNT9BO14905 357 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 AHCYL1O43865 530 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 TBCAO75347 108 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 SEC14L2O76054 403 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ZBTB11O95625 1053 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 HOXB5P09067 269 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 G6PDP11413 515 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ZNF12P17014 697 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CDAP32320 146 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 ART1P52961 327 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 HSD17B7P56937 341 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 EVCP57679 992 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 RPL7AP62424 266 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 TUBA1BP68363 451 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 LRRC74AQ0VAA2 488 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 KEAP1Q14145 624 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 FGFBP1Q14512 234 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 DRAP1Q14919 205 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CALCRLQ16602 461 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 FAM205BPQ63HN1 556 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CAPRIN2Q6IMN6 1127 aaKnown RBP4.91□□□□□ -1.62
SMAD4-216ENST00000593223 TATDN1Q6P1N9 297 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CNSTQ6PJW8 725 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 TSSK4Q6SA08 328 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 GALNTL5Q7Z4T8 443 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 HAPLN4Q86UW8 402 aa4.91□□□□□ -1.62
SMAD4-216ENST00000593223 CLEC18CQ8NCF0 446 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms