RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PKD2L2Q9NZM6 624 aa11.81□□□□□ -0.52
DDX39A-219ENST00000592927 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
DDX39A-219ENST00000592927 SUSD2Q9UGT4 822 aa11.81□□□□□ -0.52
DDX39A-219ENST00000592927 ACTL7BQ9Y614 415 aa11.81□□□□□ -0.52
DDX39A-219ENST00000592927 IQANK1A0A1B0GTG1 560 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 RGSL1A5PLK6 1076 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 MROH6A6NGR9 719 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 SMIM23A6NLE4 172 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 C2orf81A6NN90 581 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 FPGTO14772 594 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 AURKAO14965 403 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 RAD51BO15315 384 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 BCAT2O15382 392 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 NTRK1P04629 796 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 NMBRP28336 390 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 ETV3P41162 512 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 SLCO1A2P46721 670 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 SPINT3P49223 89 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 RACK1P63244 317 aaKnown RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 ACVR1Q04771 509 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 ILF2Q12905 390 aaKnown RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 SEPT6Q14141 434 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TAF1AQ15573 450 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TAF1BQ53T94 588 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TRMT10BQ6PF06 316 aaKnown RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 Q6ZVL8 140 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TECPR1Q7Z6L1 1165 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 CTAGE3PQ8IX95 158 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 NRSN1Q8IZ57 195 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TTC30BQ8N4P2 665 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 ARFGAP2Q8N6H7 521 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 PPM1NQ8N819 430 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 DENND6BQ8NEG7 585 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 STYXQ8WUJ0 223 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 DCAKDQ8WVC6 231 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 CENPTQ96BT3 561 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 NUS1Q96E22 293 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 MFSD3Q96ES6 412 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 DTD2Q96FN9 168 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 SLC6A18Q96N87 628 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TM9SF3Q9HD45 589 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 PPANQ9NQ55 473 aaKnown RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 AASDHPPTQ9NRN7 309 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 RAD18Q9NS91 495 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 TOR4AQ9NXH8 423 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 ZFATQ9P243 1243 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 NOVA2Q9UNW9 492 aaKnown RBP11.8□□□□□ -0.52
DDX39A-219ENST00000592927 PKP3Q9Y446 797 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 HS3ST3A1Q9Y663 406 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 NUMA1Q14980 2115 aa11.8□□□□□ -0.52
DDX39A-219ENST00000592927 PIEZO2Q9H5I5 2752 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 A0A1B0GTW7 788 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 B8ZZF3 427 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 STX7O15400 261 aaKnown RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 LDB2O43679 373 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 KRT38O76015 456 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 PCCBP05166 539 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 GM2AP17900 193 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 LPOP22079 712 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 PSMA3P25788 255 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 HMGCLP35914 325 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 AFF3P51826 1226 aaKnown RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CLDN2P57739 230 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 DNAJC3Q13217 504 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 IRF4Q15306 451 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 TMED2Q15363 201 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 TEAD4Q15561 434 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 WSCD2Q2TBF2 565 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CES3Q6UWW8 571 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 RFLNAQ6ZTI6 216 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 TP53I13Q8NBR0 393 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 TMEM145Q8NBT3 493 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 C1orf216Q8TAB5 229 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 FAM76AQ8TAV0 307 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CALML6Q8TD86 181 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 SKA1Q96BD8 255 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 AP2M1Q96CW1 435 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 EID2BQ96D98 161 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 MTBPQ96DY7 904 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 KLF6Q99612 283 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CPNE1Q99829 537 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 MBNL1Q9NR56 388 aaKnown RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 C20orf96Q9NUD7 363 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-219ENST00000592927 TXNDC16Q9P2K2 825 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CD84Q9UIB8 345 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 CA5BQ9Y2D0 317 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 ARL5AQ9Y689 179 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 SLCO1B1Q9Y6L6 691 aa11.79□□□□□ -0.52
DDX39A-219ENST00000592927 SPTA1P02549 2419 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 CXorf49A8MYA2 514 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 RRP8O43159 456 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 BUD23O43709 281 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 TLX3O43711 291 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms