RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 PPP1CAP62136 330 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 ZBTB17Q13105 803 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 DNASE1L3Q13609 305 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 GPR18Q14330 331 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 TDRD12Q587J7 1177 aaKnown RBP17.98■□□□□ 0.47
CIRBP-238ENST00000592412 ZNF569Q5MCW4 686 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 RASGRP3Q8IV61 690 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 CCHCR1Q8TD31 782 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 CT55Q8WUE5 264 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 FAF2Q96CS3 445 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 ZNF670Q9BS34 389 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 SPATA16Q9BXB7 569 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 SLC40A1Q9NP59 571 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 NFKBIL1Q9UBC1 381 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-238ENST00000592412 LNPEPQ9UIQ6 1025 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 TMPRSS11EQ9UL52 423 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 DNAJC16Q9Y2G8 782 aa17.98■□□□□ 0.47
CIRBP-238ENST00000592412 TNRC6AQ8NDV7 1962 aaKnown RBP17.98■□□□□ 0.47
CIRBP-238ENST00000592412 GPR89AB7ZAQ6 455 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 KCNK1O00180 336 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 RASSF9O75901 435 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 JCHAINP01591 159 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 GPR89BP0CG08 455 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 ZNF7P17097 686 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-238ENST00000592412 AMD1P17707 334 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 RPL10P27635 214 aaKnown RBP17.97■□□□□ 0.47
CIRBP-238ENST00000592412 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
CIRBP-238ENST00000592412 DCDC1P59894 354 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 LAMB3Q13751 1172 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 INSCQ1MX18 579 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.97■□□□□ 0.47
CIRBP-238ENST00000592412 CAPRIN2Q6IMN6 1127 aaKnown RBP17.97■□□□□ 0.47
CIRBP-238ENST00000592412 ABRAXAS1Q6UWZ7 409 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 FAM92BQ6ZTR7 304 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 C11orf96Q7Z7L8 435 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 APLFQ8IW19 511 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-238ENST00000592412 GLYATL1Q969I3 302 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 HDAC11Q96DB2 347 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 TIMM29Q9BSF4 260 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 ZSCAN5AQ9BUG6 496 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 TWSG1Q9GZX9 223 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 ZFYVE1Q9HBF4 777 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 LHX9Q9NQ69 397 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 POT1Q9NUX5 634 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 KCND3Q9UK17 655 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 SHOC2Q9UQ13 582 aa17.97■□□□□ 0.47
CIRBP-238ENST00000592412 A0A1B0GTH6 734 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 PIPSLA2A3N6 862 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 PDZK1P1A8MUH7 402 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 MTA2O94776 668 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 RECKO95980 971 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 RNF224P0DH78 156 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 NELFEP18615 380 aaKnown RBP17.96■□□□□ 0.47
CIRBP-238ENST00000592412 GNLYP22749 145 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 GJC1P36383 396 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 DRG2P55039 364 aaKnown RBP17.96■□□□□ 0.47
CIRBP-238ENST00000592412 TAS2R40P59535 323 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 TYRO3Q06418 890 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 SEMA5AQ13591 1074 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 CACHD1Q5VU97 1274 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 TMC3Q7Z5M5 1100 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 LRRTM4Q86VH4 590 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 TRIM48Q8IWZ4 208 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 TRAM1L1Q8N609 369 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 ACTL8Q9H568 366 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 LRRC4CQ9HCJ2 640 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 SEMA5BQ9P283 1151 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 EPHA6Q9UF33 1036 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 PADI1Q9ULC6 663 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 WDR37Q9Y2I8 494 aa17.96■□□□□ 0.47
CIRBP-238ENST00000592412 SHANK1Q9Y566 2161 aa17.96■□□□□ 0.46
CIRBP-238ENST00000592412 A0A087X0T9 212 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 IGHV5-51A0A0C4DH38 117 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 KMOO15229 486 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 FAM228BP0C875 321 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 FOLR1P15328 257 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 SSR1P43307 286 aaKnown RBP17.95■□□□□ 0.46
CIRBP-238ENST00000592412 RPS18P62269 152 aaKnown RBP17.95■□□□□ 0.46
CIRBP-238ENST00000592412 ANO6Q4KMQ2 910 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 AGAP9Q5VTM2 703 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 CPZQ66K79 652 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 PWWP2BQ6NUJ5 590 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 WASH2PQ6VEQ5 465 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 PPP1R3BQ86XI6 285 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 SLC41A2Q96JW4 573 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 CEP41Q9BYV8 373 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 RAB33BQ9H082 229 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 WASH6PQ9NQA3 447 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 PLEKHB1Q9UF11 243 aaPredicted RBP17.95■□□□□ 0.46
CIRBP-238ENST00000592412 ZNF711Q9Y462 761 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 DOPEY1Q5JWR5 2465 aa17.95■□□□□ 0.46
CIRBP-238ENST00000592412 MYO1FO00160 1098 aa17.94■□□□□ 0.46
CIRBP-238ENST00000592412 SLC4A1P02730 911 aa17.94■□□□□ 0.46
CIRBP-238ENST00000592412 BPIP17213 487 aa17.94■□□□□ 0.46
CIRBP-238ENST00000592412 IFI35P80217 286 aaPredicted RBP17.94■□□□□ 0.46
CIRBP-238ENST00000592412 PPIDQ08752 370 aaKnown RBP17.94■□□□□ 0.46
CIRBP-238ENST00000592412 KCNAB1Q14722 419 aa17.94■□□□□ 0.46
CIRBP-238ENST00000592412 HADHQ16836 314 aaKnown RBP17.94■□□□□ 0.46
CIRBP-238ENST00000592412 PDPK2PQ6A1A2 396 aa17.94■□□□□ 0.46
CIRBP-238ENST00000592412 IRGCQ6NXR0 463 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms