RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 PRLP01236 227 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 RPLP0P05388 317 aaKnown RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 ABHD2P08910 425 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 CCNB1P14635 433 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 ZNF30P17039 623 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 POLD2P49005 469 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 EPHB1P54762 984 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 TMPRSS3P57727 454 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 RPL26P61254 145 aaKnown RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 CDK3Q00526 305 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 ILF3Q12906 894 aaKnown RBP eCLIP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 GPS1Q13098 491 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 COL9A2Q14055 689 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 C14orf28Q4W4Y0 310 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 CERCAMQ5T4B2 595 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 SLC9A4Q6AI14 798 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 RAET1GQ6H3X3 334 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 B3GNT8Q7Z7M8 397 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 NLRP8Q86W28 1048 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 NRROSQ86YC3 692 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 LSM14AQ8ND56 463 aaKnown RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 P3H4Q92791 437 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 SERPINB12Q96P63 405 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 FAM118BQ9BPY3 351 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 FRMD8Q9BZ67 464 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 ABCG8Q9H221 673 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 SPATS2LQ9NUQ6 558 aaKnown RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 RPL26L1Q9UNX3 145 aaKnown RBP17.3■□□□□ 0.36
CIRBP-235ENST00000591935 TTLL3Q9Y4R7 772 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 ST14Q9Y5Y6 855 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 BAHCC1Q9P281 2608 aa17.3■□□□□ 0.36
CIRBP-235ENST00000591935 SCN8AQ9UQD0 1980 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 A0A0J9YYE9 177 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 D6RAR5 112 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 ZNF189O75820 626 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-235ENST00000591935 SOD1P00441 154 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 TRBC1P01850 177 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 ITGA2BP08514 1039 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 RBP3P10745 1247 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 GPR1P46091 355 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 NR2C2P49116 596 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 INHBCP55103 352 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 XRCC4Q13426 336 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 RNASEH2BQ5TBB1 312 aaKnown RBP17.29■□□□□ 0.36
CIRBP-235ENST00000591935 LRRC66Q68CR7 880 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 FOXR1Q6PIV2 292 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 CCDC25Q86WR0 208 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 CCNJLQ8IV13 435 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 Q8N9G6 341 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-235ENST00000591935 GPBAR1Q8TDU6 330 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 SCAMP4Q969E2 229 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 ZBTB9Q96C00 473 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 AGAP2Q99490 1192 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 CCDC77Q9BR77 488 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 TDRD1Q9BXT4 1180 aaKnown RBP17.29■□□□□ 0.36
CIRBP-235ENST00000591935 CNOT10Q9H9A5 744 aaKnown RBP17.29■□□□□ 0.36
CIRBP-235ENST00000591935 LRIT1Q9P2V4 623 aa17.29■□□□□ 0.36
CIRBP-235ENST00000591935 MGAQ8IWI9 3026 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CDRT15L2A8MXV6 281 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 B4DGG1 531 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 KCNK1O00180 336 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 RASGRF2O14827 1237 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 PLD2O14939 933 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 KLK10O43240 276 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 TNFSF15O95150 251 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 JCHAINP01591 159 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 SHBGP04278 402 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 IVLP07476 585 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 MMP2P08253 660 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 AK4P27144 223 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CCKBRP32239 447 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 VPS41P49754 854 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 PPP2R2AP63151 447 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 DYNLT1P63172 113 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CXADRP78310 365 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 TNFAIP8L3Q5GJ75 292 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 ADAMTSL4Q6UY14 1074 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 ZNF765Q7L2R6 523 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 RAB11FIP2Q7L804 512 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CLEC14AQ86T13 490 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 PPIL6Q8IXY8 311 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 NRSN1Q8IZ57 195 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 FBXO39Q8N4B4 442 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 PLD5Q8N7P1 536 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CNTD1Q8N815 330 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 CCNYQ8ND76 341 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 TMEM159Q96B96 161 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 HAUS1Q96CS2 278 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 AP2M1Q96CW1 435 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 HDAC11Q96DB2 347 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 RTP4Q96DX8 246 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 TMEM121Q9BTD3 319 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 PPCSQ9HAB8 311 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-235ENST00000591935 SUFUQ9UMX1 484 aa17.28■□□□□ 0.36
CIRBP-235ENST00000591935 NOVA2Q9UNW9 492 aaKnown RBP17.28■□□□□ 0.36
CIRBP-235ENST00000591935 SLC17A4Q9Y2C5 497 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms