RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 RNASEH2AO75792 299 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 SMNDC1O75940 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 SRP72O76094 671 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 PCDH8O95206 1070 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 APOA4P06727 396 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 GSTA1P08263 222 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 HOXC4P09017 264 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 HLA-EP13747 358 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 EPHA1P21709 976 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 P2RY2P41231 377 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 NSG1P42857 185 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 CXCL12P48061 93 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 LEPRP48357 1165 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ARCN1P48444 511 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 LIG3P49916 1009 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 SERPINB8P50452 374 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 CCR5P51681 352 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 GPX6P59796 221 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 NAA20P61599 178 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ZNF844Q08AG5 666 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 NFATC2Q13469 925 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 FASTKD3Q14CZ7 662 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ACOX1Q15067 660 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 UAP1Q16222 522 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TYSND1Q2T9J0 566 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TTLL9Q3SXZ7 439 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 USP39Q53GS9 565 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TAF1BQ53T94 588 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TEDDM1Q5T9Z0 273 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ZNF470Q6ECI4 717 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ESRP1Q6NXG1 681 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 KLC3Q6P597 504 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 PARS2Q7L3T8 475 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 STRA8Q7Z7C7 330 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TRIM69Q86WT6 500 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 DCP2Q8IU60 420 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 GSPT2Q8IYD1 628 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TTC30BQ8N4P2 665 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 C2CD4AQ8NCU7 369 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 CADM4Q8NFZ8 388 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 PJA1Q8NG27 643 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 OR13J1Q8NGT2 312 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 OR2T34Q8NGX1 318 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 FAM131CQ96AQ9 280 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 MFSD3Q96ES6 412 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ZIM3Q96PE6 472 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 LENG8Q96PV6 779 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 PAFAH2Q99487 392 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 COPS8Q99627 209 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 SH3GL2Q99962 352 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 DHRS4Q9BTZ2 278 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 CLPBQ9H078 707 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 CENPHQ9H3R5 247 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 AKTIPQ9H8T0 292 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 RMI1Q9H9A7 625 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TBC1D17Q9HA65 648 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 SYTL2Q9HCH5 934 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 FBRSL1Q9HCM7 1045 aaKnown RBP7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ITM2CQ9NQX7 267 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TAS2R13Q9NYV9 303 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 DCDC2Q9UHG0 476 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 CRLS1Q9UJA2 301 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 GNPTGQ9UJJ9 305 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ANKRD6Q9Y2G4 727 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 FADS3Q9Y5Q0 445 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ACTL7AQ9Y615 435 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 ARL5AQ9Y689 179 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 TRPM6Q9BX84 2022 aa7.27□□□□□ -1.25
SMAD4-210ENST00000590061 REV3LO60673 3130 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 C5orf42Q9H799 3197 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 A0A087X1B8 175 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 TCRBV21S2A2A0A5A6 115 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 CCDC162PA2VCL2 907 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 PABPN1LA6NDY0 278 aaKnown RBP7.26□□□□□ -1.25
SMAD4-210ENST00000590061 NPIPB15A6NHN6 443 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-210ENST00000590061 AGAP14A8MT82 685 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 LINC01387J3KSC0 135 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 PRMT5O14744 637 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-210ENST00000590061 MID1O15344 667 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 PLRG1O43660 514 aaKnown RBP7.26□□□□□ -1.25
SMAD4-210ENST00000590061 NDUFS2O75306 463 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 VPS26AO75436 327 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 ALX3O95076 343 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 SNUPNO95149 360 aaKnown RBP7.26□□□□□ -1.25
SMAD4-210ENST00000590061 WISP1O95388 367 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 CLDN7O95471 211 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 PRAMEF1O95521 474 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 GOT2P00505 430 aaKnown RBP7.26□□□□□ -1.25
SMAD4-210ENST00000590061 FTH1P02794 183 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 CTSLP07711 333 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 OR56A5P0C7T3 313 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 ERVK-10P10266 1014 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 STMN1P16949 149 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 CTPS1P17812 591 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 VCLP18206 1134 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 RPS3P23396 243 aaKnown RBP eCLIP7.26□□□□□ -1.251e-8■■■■□ 23.6
SMAD4-210ENST00000590061 HTR1BP28222 390 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 NMBRP28336 390 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 MC4RP32245 332 aa7.26□□□□□ -1.25
SMAD4-210ENST00000590061 CNR2P34972 360 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms