RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TRNAU1APQ9NX07 287 aaKnown RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 VPS18Q9P253 973 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 NFKBIL1Q9UBC1 381 aaPredicted RBP10.28□□□□□ -0.76
SDF2-208ENST00000589788 PADI4Q9UM07 663 aa10.28□□□□□ -0.76
SDF2-208ENST00000589788 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 LY6G6EA0A0G2JKS1 128 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FAM149AA5PLN7 773 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FAM221BA6H8Z2 402 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 B4DGG1 531 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 PSMD3O43242 534 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 CEP104O60308 925 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 OPA1O60313 960 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 PPFIA2O75334 1257 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 IFNB1P01574 187 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FGGP02679 453 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FUCA1P04066 466 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 BPIP17213 487 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 CXCR5P32302 372 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 ADCY8P40145 1251 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 DNTTIP2Q5QJE6 756 aaKnown RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 HES3Q5TGS1 186 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 GUSBP11Q6P575 273 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FIGNL1Q6PIW4 674 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 UNQ6494/PRO21346Q6UXR6 183 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 RANBP10Q6VN20 620 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 CCNI2Q6ZMN8 369 aaPredicted RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 TTC30BQ8N4P2 665 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 TAB3Q8N5C8 712 aaPredicted RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 TRAM1L1Q8N609 369 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 CCDC89Q8N998 374 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 CCL4L1Q8NHW4 92 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 MAPK15Q8TD08 544 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 GPBAR1Q8TDU6 330 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FBF1Q8TES7 1133 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 ZNF837Q96EG3 531 aaPredicted RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 PLEKHG4BQ96PX9 1271 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 RMI1Q9H9A7 625 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
SDF2-208ENST00000589788 ZNHIT2Q9UHR6 403 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 FEZ2Q9UHY8 353 aaPredicted RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 CNOT6Q9ULM6 557 aaKnown RBP10.27□□□□□ -0.77
SDF2-208ENST00000589788 SNX12Q9UMY4 172 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 U3KQA8 63 aa10.27□□□□□ -0.77
SDF2-208ENST00000589788 DNAH14Q0VDD8 3507 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 TPRP12270 2363 aaKnown RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 EME2A4GXA9 379 aaPredicted RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 C2orf81A6NN90 581 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 CES2O00748 559 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 BUD23O43709 281 aaKnown RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 USP12O75317 370 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 METTL18O95568 372 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 CRTAMO95727 393 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 SNRPBP14678 240 aaKnown RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 TCP1P17987 556 aaKnown RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 LPOP22079 712 aaPredicted RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 ADRA1AP35348 466 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 SPAM1P38567 509 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 ACTR1BP42025 376 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 LMAN1P49257 510 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 ACTR1AP61163 376 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 PDE1BQ01064 536 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 INSM1Q01101 510 aaPredicted RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 CTBSQ01459 385 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 TNP2Q05952 138 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 BIRC2Q13490 618 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 OLIG2Q13516 323 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 LRP8Q14114 963 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 SPARCL1Q14515 664 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 TAF1AQ15573 450 aaPredicted RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 OASLQ15646 514 aaKnown RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 CCNG2Q16589 344 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 LONRF2Q1L5Z9 754 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 PYCR3Q53H96 274 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 SLC30A9Q6PML9 568 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 PHYKPLQ8IUZ5 450 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 OR6C4Q8NGE1 309 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 GDAP1Q8TB36 358 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 GATA6Q92908 595 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 GLYATL1Q969I3 302 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 RTP4Q96DX8 246 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 SCARF2Q96GP6 870 aaPredicted RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 OSBPL9Q96SU4 736 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 OR2AG1Q9H205 316 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 LRRC40Q9H9A6 602 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 ARFGAP3Q9NP61 516 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 IL17CQ9P0M4 197 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 TAAR2Q9P1P5 351 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 CLCA2Q9UQC9 943 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 ARL5AQ9Y689 179 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 SAR1BQ9Y6B6 198 aa10.26□□□□□ -0.77
SDF2-208ENST00000589788 OAS3Q9Y6K5 1087 aaKnown RBP10.26□□□□□ -0.77
SDF2-208ENST00000589788 PLXNB3Q9ULL4 1909 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 CEP295Q9C0D2 2601 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 ARHGEF17Q96PE2 2063 aaPredicted RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 ACACBO00763 2458 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 KNTC1P50748 2209 aa10.25□□□□□ -0.77
SDF2-208ENST00000589788 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
SDF2-208ENST00000589788 MYLKQ15746 1914 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms