RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ANKRD66B4E2M5 251 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 UBXN8O00124 270 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CBX4O00257 560 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 UBFD1O14562 309 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TRIM24O15164 1050 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TBC1D4O60343 1298 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CDK14O94921 469 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MATN4O95460 622 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 FAM58BPP0C7Q3 252 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PABPC4LP0CB38 370 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 IL10P22301 178 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PTGER3P43115 390 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 RPL5P46777 297 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 KCNC1P48547 511 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SLC11A1P49279 550 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 KCNQ1P51787 676 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CLCN4P51793 760 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CCNHP51946 323 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ZNF140P52738 457 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CDH13P55290 713 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 FOXM1Q08050 763 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DYNC1I2Q13409 638 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MAP7Q14244 749 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ARHGEF6Q15052 776 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PPP1R3AQ16821 1122 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 UGT3A2Q3SY77 523 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 AASDHQ4L235 1098 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ZNF549Q6P9A3 640 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PAOXQ6QHF9 649 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DENND1CQ8IV53 801 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CHCHD4Q8N4Q1 142 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MINDY1Q8N5J2 469 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DBF4BQ8NFT6 615 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 OR56A4Q8NGH8 313 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 LPGAT1Q92604 370 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ZUFSPQ96AP4 578 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DUS3LQ96G46 650 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TRIB3Q96RU7 358 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ATOH8Q96SQ7 321 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 C8orf4Q9NR00 106 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 RNF186Q9NXI6 227 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SUN2Q9UH99 717 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 FAM50BQ9Y247 325 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TBC1D30Q9Y2I9 924 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TNPO3Q9Y5L0 923 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SLC4A7Q9Y6M7 1214 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MIA3Q5JRA6 1907 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PLXNA3P51805 1871 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 C15orf38-AP3S2A0A0A6YYH1 394 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 BTN3A1O00481 513 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 FBP2O00757 339 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MUSKO15146 869 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 HNRNPRO43390 633 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MMP20O60882 483 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DNAJA2O60884 412 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 UPP2O95045 317 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 NPPAP01160 153 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ESR1P03372 595 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CAPNS1P04632 268 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 GALTP07902 379 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PIRTP0C851 137 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 UROSP10746 265 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 HGFP14210 728 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PKMP14618 531 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PSMC3P17980 439 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CHRM3P20309 590 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 GPX3P22352 226 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PSMA3P25788 255 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 HOXD9P28356 352 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 EEF1DP29692 281 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 GPC1P35052 558 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 DPP6P42658 865 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ADARP55265 1226 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 KCNK10P57789 538 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 NOGQ13253 232 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SQSTM1Q13501 440 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 VEPH1Q14D04 833 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 KANK2Q63ZY3 851 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SLC8B1Q6J4K2 584 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PAQR3Q6TCH7 311 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 UGT2A3Q6UWM9 527 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CERS6Q6ZMG9 384 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 ARPINQ7Z6K5 226 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 GPSM1Q86YR5 675 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 AHI1Q8N157 1196 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 OR7D4Q8NG98 312 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TRPC4APQ8TEL6 797 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 KCNJ9Q92806 393 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 PKP2Q99959 881 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SH3GL3Q99963 347 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 HAUS8Q9BT25 410 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 OSBPL11Q9BXB4 747 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 SPATA16Q9BXB7 569 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 MRPS26Q9BYN8 205 aaKnown RBP7.34□□□□□ -1.23
ZNF540-206ENST00000589117 TNKS2Q9H2K2 1166 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 CWH43Q9H720 699 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 BRD7Q9NPI1 651 aa7.34□□□□□ -1.23
ZNF540-206ENST00000589117 POLR3BQ9NW08 1133 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms