RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 RING1Q06587 406 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 NFATC3Q12968 1075 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 ATP1A4Q13733 1029 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 PCBP2Q15366 365 aaKnown RBP eCLIP13.3□□□□□ -0.282e-8■■■■■ 32.2
KDM4B-208ENST00000589104 CTF1Q16619 201 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 AARS2Q5JTZ9 985 aaKnown RBP13.3□□□□□ -0.28
KDM4B-208ENST00000589104 CCNYL2Q5T2Q4 361 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 SPPL2CQ8IUH8 684 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 CARNMT1Q8N4J0 409 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 OR8J3Q8NGG0 315 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 NEURL2Q9BR09 285 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 ALG2Q9H553 416 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 ADA2Q9NZK5 511 aa13.3□□□□□ -0.28
KDM4B-208ENST00000589104 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 IFRD1O00458 451 aaPredicted RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 C1RP00736 705 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ZNF12P17014 697 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 CHRM3P20309 590 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 FGFR3P22607 806 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 PXNP49023 591 aaPredicted RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TUFMP49411 452 aaKnown RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 VPS26BQ4G0F5 336 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ALFQ53S48 1182 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 PITRM1Q5JRX3 1037 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 BRSK1Q8TDC3 778 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 SCYL1Q96KG9 808 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 KCNA7Q96RP8 456 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ALG9Q9H6U8 611 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 SPO11Q9Y5K1 396 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 DPM1O60762 260 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TULP3O75386 442 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 GJB3O75712 270 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ZBTB7AO95365 584 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 GOT2P00505 430 aaKnown RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 THP07101 528 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ODC1P11926 461 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 PRPH2P23942 346 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 PBX3P40426 434 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 RENBPP51606 427 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ALDH3A2P51648 485 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TSPY1Q01534 308 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 RELAQ04206 551 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 BCL2A1Q16548 175 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TAF2Q6P1X5 1199 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TLK2Q86UE8 772 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 IGSF8Q969P0 613 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ITPKCQ96DU7 683 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 HEPHQ9BQS7 1158 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 NAA50Q9GZZ1 169 aaKnown RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 PAK1IP1Q9NWT1 392 aaPredicted RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TMEFF2Q9UIK5 374 aaPredicted RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 SLC16A6O15403 523 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 CFLARO15519 480 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 CYBBP04839 570 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 JUNDP17535 347 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 LBPP18428 481 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 HLA-DPA1P20036 260 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 IQCCQ4KMZ1 466 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ABRAXAS1Q6UWZ7 409 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 BIRC7Q96CA5 298 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 VPS50Q96JG6 964 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 ZNF583Q96ND8 569 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 OSBPL10Q9BXB5 764 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TRIM15Q9C019 465 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TRNAU1APQ9NX07 287 aaKnown RBP13.29□□□□□ -0.28
KDM4B-208ENST00000589104 COMMD8Q9NX08 183 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 GNPTGQ9UJJ9 305 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 KCTD3Q9Y597 815 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 TRPV2Q9Y5S1 764 aa13.29□□□□□ -0.28
KDM4B-208ENST00000589104 LTBP2Q14767 1821 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 RSL1D1O76021 490 aaKnown RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 FGF1P05230 155 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CLCN7P51798 805 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 ERVK-8P63133 956 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 DSC2Q02487 901 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CLCQ05315 142 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CD300CQ08708 224 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 METTL2BQ6P1Q9 378 aaKnown RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 ITIH5Q86UX2 942 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CCNYL1Q8N7R7 359 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 PNPLA1Q8N8W4 532 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 ZNF548Q8NEK5 533 aaPredicted RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 HDAC2Q92769 488 aaKnown RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 AURKBQ96GD4 344 aaPredicted RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 AMBRA1Q9C0C7 1298 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CXorf21Q9HAI6 301 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CORINQ9Y5Q5 1042 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 CD160O95971 181 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 UROSP10746 265 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 RPS9P46781 194 aaKnown RBP13.28□□□□□ -0.28
KDM4B-208ENST00000589104 MAPKAPK2P49137 400 aa13.28□□□□□ -0.28
KDM4B-208ENST00000589104 DIO3P55073 304 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms