RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MSH3P20585 1137 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 DGKAP23743 735 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 C1orf61Q13536 156 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 LONRF1Q17RB8 773 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 UAP1L1Q3KQV9 507 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 PYCR3Q53H96 274 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 PRRT3Q5FWE3 981 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 SPANXN3Q5MJ09 141 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CRTC3Q6UUV7 619 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 KANSL1Q7Z3B3 1105 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 LDB1Q86U70 411 aaPredicted RBP18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 ALYREFQ86V81 257 aaKnown RBP18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 GALNT13Q8IUC8 556 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CCNJLQ8IV13 435 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 IFT20Q8IY31 132 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 OTUD6BQ8N6M0 293 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 RASGEF1AQ8N9B8 481 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 SAP25Q8TEE9 199 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 FAM129AQ9BZQ8 928 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 PHACTR1Q9C0D0 580 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 TMEM168Q9H0V1 697 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 IGLV3-16A0A075B6K0 115 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CHUKO15111 745 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CTSCP53634 463 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 GTF2H3Q13889 308 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 STPG1Q5TH74 334 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 STEAP4Q687X5 459 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 DET1Q7L5Y6 550 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 LMX1AQ8TE12 382 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 TTC25Q96NG3 672 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 OR2M4Q96R27 311 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 FOXP3Q9BZS1 431 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 CLPBQ9H078 707 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 RMI1Q9H9A7 625 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 C20orf96Q9NUD7 363 aaPredicted RBP18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 SPASTQ9UBP0 616 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 ZNHIT2Q9UHR6 403 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 PLEKHM1Q9Y4G2 1056 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 GPSM3Q9Y4H4 160 aa18.74■□□□□ 0.59
CLPTM1-209ENST00000588855 GPR89AB7ZAQ6 455 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 AQP9O43315 295 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 GRID2O43424 1007 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 PCDHGA12O60330 932 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 GPR89BP0CG08 455 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 CTSEP14091 401 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 CUL1Q13616 776 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 TRAPPC5Q8IUR0 188 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 ZNF547Q8IVP9 402 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 CCL4L1Q8NHW4 92 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 PYROXD1Q8WU10 500 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 DCUN1D1Q96GG9 259 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 MTRF1LQ9UGC7 380 aaKnown RBP18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 ST14Q9Y5Y6 855 aa18.73■□□□□ 0.59
CLPTM1-209ENST00000588855 ARID1BQ8NFD5 2236 aaPredicted RBP18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 OR2AG2A6NM03 316 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 CFAP99D6REC4 459 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 ITIH4Q14624 930 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 PLA2G4EQ3MJ16 856 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 AARS2Q5JTZ9 985 aaKnown RBP18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 LYPLAL1Q5VWZ2 237 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 ZNF470Q6ECI4 717 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 MRNIPQ6NTE8 343 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 NEPROQ6NW34 567 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 CERS6Q6ZMG9 384 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 CAPN12Q6ZSI9 719 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 LRRTM4Q86VH4 590 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 KCNMB4Q86W47 210 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 SLC25A45Q8N413 288 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 SGF29Q96ES7 293 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 C9orf72Q96LT7 481 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 FMO2Q99518 471 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 TRNAU1APQ9NX07 287 aaKnown RBP18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 NFU1Q9UMS0 254 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 PCDHGB2Q9Y5G2 931 aa18.72■□□□□ 0.59
CLPTM1-209ENST00000588855 CEP250Q9BV73 2442 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 FFAR2O15552 330 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 SGTAO43765 313 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 OR1I1O60431 355 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 F7P08709 466 aaPredicted RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 RALBP11234 206 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 ACP5P13686 325 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 CD59P13987 128 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 ATP1B2P14415 290 aaPredicted RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 MAGEA4P43358 317 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 LIMK1P53667 647 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 THOC5Q13769 683 aaKnown RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 ELOCQ15369 112 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 TYSND1Q2T9J0 566 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 HSP90AA5PQ58FG0 334 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 TRMT10BQ6PF06 316 aaKnown RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 TMEM220Q6QAJ8 160 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 PACS1Q6VY07 963 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 CHST15Q7LFX5 561 aaPredicted RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 FSTL5Q8N475 847 aaPredicted RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 CLDN19Q8N6F1 224 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 GPR150Q8NGU9 434 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 HEXDCQ8WVB3 486 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 CERS2Q96G23 380 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 ANKZF1Q9H8Y5 726 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 467.6 ms