RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ZNHIT2Q9UHR6 403 aa18.93■□□□□ 0.62
DDX39A-204ENST00000586558 TEX264Q9Y6I9 313 aa18.93■□□□□ 0.62
DDX39A-204ENST00000586558 FAM169AQ9Y6X4 670 aa18.93■□□□□ 0.62
DDX39A-204ENST00000586558 TMEM131Q92545 1883 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 TPP1O14773 563 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 SLC30A4O14863 429 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 KMOO15229 486 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 CD3EAPO15446 510 aaKnown RBP18.92■□□□□ 0.62
DDX39A-204ENST00000586558 BANF1O75531 89 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 ALPPL2P10696 532 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 ELK3P41970 407 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 ARCN1P48444 511 aaKnown RBP18.92■□□□□ 0.62
DDX39A-204ENST00000586558 TTPAP49638 278 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 CDKN1CP49918 316 aaPredicted RBP18.92■□□□□ 0.62
DDX39A-204ENST00000586558 TUBB4BP68371 445 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 TRADDQ15628 312 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 LONRF1Q17RB8 773 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 ZNF648Q5T619 568 aaPredicted RBP18.92■□□□□ 0.62
DDX39A-204ENST00000586558 PACS1Q6VY07 963 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 CEP128Q6ZU80 1094 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 LRRTM4Q86VH4 590 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 GKN2Q86XP6 184 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 LMNTD2Q8IXW0 634 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 GPR150Q8NGU9 434 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 GPBAR1Q8TDU6 330 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 SCG3Q8WXD2 468 aaKnown RBP18.92■□□□□ 0.62
DDX39A-204ENST00000586558 FCRL3Q96P31 734 aaPredicted RBP18.92■□□□□ 0.62
DDX39A-204ENST00000586558 DUSP23Q9BVJ7 150 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 GSDMCQ9BYG8 508 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 TSPYL1Q9H0U9 437 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 TMEM168Q9H0V1 697 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 ZDHHC18Q9NUE0 388 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 NLGN3Q9NZ94 848 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 GPR34Q9UPC5 381 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 CHMP2BQ9UQN3 213 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 GPSM3Q9Y4H4 160 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 CEP250Q9BV73 2442 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 LRP4O75096 1905 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 LAMA1P25391 3075 aa18.92■□□□□ 0.62
DDX39A-204ENST00000586558 KLHL33A6NCF5 533 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 PFDN6O15212 129 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 ANXA6P08133 673 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 PRSS56P0CW18 603 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 NSG1P42857 185 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 CUL1Q13616 776 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 NEPROQ6NW34 567 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 SDCCAG8Q86SQ7 713 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-204ENST00000586558 TRAPPC5Q8IUR0 188 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 IGDCC3Q8IVU1 814 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 NAXDQ8IW45 347 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 RASGEF1AQ8N9B8 481 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 OR4C6Q8NH72 309 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 GABPB2Q8TAK5 448 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-204ENST00000586558 CALML6Q8TD86 181 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 TCF12Q99081 682 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 TRIM56Q9BRZ2 755 aaKnown RBP18.91■□□□□ 0.62
DDX39A-204ENST00000586558 TIMM29Q9BSF4 260 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 CLPBQ9H078 707 aa18.91■□□□□ 0.62
DDX39A-204ENST00000586558 MTRF1LQ9UGC7 380 aaKnown RBP18.91■□□□□ 0.62
DDX39A-204ENST00000586558 DNMT3AQ9Y6K1 912 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-204ENST00000586558 CABIN1Q9Y6J0 2220 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 F8W8V4 182 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 QSOX1O00391 747 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 KCNJ13O60928 360 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 AP2A2O94973 939 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 ATP1B2P14415 290 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 VCLP18206 1134 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 OGNP20774 298 aaKnown RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 PMLP29590 882 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 B4GALNT1Q00973 533 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 CTBSQ01459 385 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 C1orf61Q13536 156 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 THOC5Q13769 683 aaKnown RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 FRG1Q14331 258 aaKnown RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 BCL7AQ4VC05 210 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 RNF187Q5TA31 235 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 STEAP4Q687X5 459 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 TAF8Q7Z7C8 310 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 PIP4P1Q86T03 277 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 IFT20Q8IY31 132 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 ZBED8Q8IZ13 594 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 OTUD6BQ8N6M0 293 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 FBXO36Q8NEA4 188 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 SETD7Q8WTS6 366 aaKnown RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 WDR83Q9BRX9 315 aaKnown RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 FAM167BQ9BTA0 163 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 C20orf96Q9NUD7 363 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 MARCH4Q9P2E8 410 aaPredicted RBP18.9■□□□□ 0.62
DDX39A-204ENST00000586558 DOLKQ9UPQ8 538 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 VPS9D1Q9Y2B5 631 aa18.9■□□□□ 0.62
DDX39A-204ENST00000586558 YY2O15391 372 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 FFAR2O15552 330 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 ZNF7P17097 686 aaPredicted RBP18.89■□□□□ 0.61
DDX39A-204ENST00000586558 CLCNKAP51800 687 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 CTSCP53634 463 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 HLTFQ14527 1009 aaKnown RBP eCLIP18.89■□□□□ 0.61
DDX39A-204ENST00000586558 TYSND1Q2T9J0 566 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 CRTC3Q6UUV7 619 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 UNC5AQ6ZN44 842 aa18.89■□□□□ 0.61
DDX39A-204ENST00000586558 CHST15Q7LFX5 561 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms