RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 LRP8Q14114 963 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 LONRF1Q17RB8 773 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 INSCQ1MX18 579 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 FNBP1LQ5T0N5 605 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 ZNF449Q6P9G9 518 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 CRTC3Q6UUV7 619 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 CES3Q6UWW8 571 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 SERPINA9Q86WD7 417 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 PALM2Q8IXS6 379 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 ZBED8Q8IZ13 594 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 MPP5Q8N3R9 675 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAF4-215ENST00000584944 DDHD1Q8NEL9 900 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 OR13J1Q8NGT2 312 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 CALML6Q8TD86 181 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 OR1E3Q8WZA6 343 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 GATA6Q92908 595 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 GLMNQ92990 594 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 MFSD3Q96ES6 412 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 PDXPQ96GD0 296 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 COX14Q96I36 57 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 EBNA1BP2Q99848 306 aaKnown RBP13.71□□□□□ -0.21
TRAF4-215ENST00000584944 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 L2HGDHQ9H9P8 463 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 MRPL40Q9NQ50 206 aaKnown RBP13.71□□□□□ -0.21
TRAF4-215ENST00000584944 GPR27Q9NS67 375 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-215ENST00000584944 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
TRAF4-215ENST00000584944 SMOXQ9NWM0 555 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 SUFUQ9UMX1 484 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 CHMP2BQ9UQN3 213 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 SLC17A4Q9Y2C5 497 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 DGKBQ9Y6T7 804 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 WDFY3Q8IZQ1 3526 aa13.71□□□□□ -0.21
TRAF4-215ENST00000584944 CACNA1GO43497 2377 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 KMOO15229 486 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 GRID2O43424 1007 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 PCDHGA12O60330 932 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 PIAS2O75928 621 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 USP1O94782 785 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 IVLP07476 585 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ELK3P41970 407 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 MAGEA3P43357 314 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ARSDP51689 593 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 CUL1Q13616 776 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ANKRD20A4Q4UJ75 823 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 SPANXN3Q5MJ09 141 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 TPRG1LQ5T0D9 272 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-215ENST00000584944 KIAA0930Q6ICG6 404 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-215ENST00000584944 DET1Q7L5Y6 550 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 CHST15Q7LFX5 561 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-215ENST00000584944 LRRTM4Q86VH4 590 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 GATAD2AQ86YP4 633 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ANKMY2Q8IV38 441 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 RBFAQ8N0V3 343 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 SDR16C5Q8N3Y7 309 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ZNF548Q8NEK5 533 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-215ENST00000584944 RHBDD1Q8TEB9 315 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ART4Q93070 314 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ZNF778Q96MU6 729 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 FAM167BQ9BTA0 163 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 DUSP23Q9BVJ7 150 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 CLPBQ9H078 707 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 OSGEPL1Q9H4B0 414 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ZDHHC3Q9NYG2 299 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 ATXN10Q9UBB4 475 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 PCDHGB2Q9Y5G2 931 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
TRAF4-215ENST00000584944 SPAARA0A1B0GVQ0 90 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 TMEM8BA6NDV4 472 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 OR51F1A6NGY5 319 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 OR2AG2A6NM03 316 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 QSOX1O00391 747 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 EIF3HO15372 352 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 GPR39O43194 453 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 HYAL3O43820 417 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 NUAK1O60285 661 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 SLU7O95391 586 aaKnown RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ACP5P13686 325 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 CD59P13987 128 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ZNF7P17097 686 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ZNF8P17098 575 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 DGKAP23743 735 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ACRV1P26436 265 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 NSG1P42857 185 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 SIM1P81133 766 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 XIAPP98170 497 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ACVR1Q04771 509 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 C1orf61Q13536 156 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 SMAD1Q15797 465 aaKnown RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 PLA2G4EQ3MJ16 856 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ZNF648Q5T619 568 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-215ENST00000584944 NEPROQ6NW34 567 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 SLC30A9Q6PML9 568 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 ADGRG6Q86SQ4 1221 aa13.69□□□□□ -0.22
TRAF4-215ENST00000584944 FBXO36Q8NEA4 188 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms