RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 EXOC3O60645 756 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 HSF2BPO75031 334 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 IGKV2-30P06310 120 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FESP07332 822 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 HNRNPCP07910 306 aaKnown RBP eCLIP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 RNF224P0DH78 156 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CYBAP13498 195 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SCG2P13521 617 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 DESP17661 470 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 HLA-DPA1P20036 260 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PPIFP30405 207 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 LONP1P36776 959 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PLD1Q13393 1074 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GALNT3Q14435 633 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC9B1Q4ZJI4 515 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ARL13AQ5H913 290 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 HECTD3Q5T447 861 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 NUGGCQ68CJ6 796 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA0408Q6ZU52 694 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GPR149Q86SP6 731 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 VRK3Q8IV63 474 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GALNT4Q8N4A0 578 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SYT2Q8N9I0 419 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 POC5Q8NA72 575 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ZBTB8BQ8NAP8 495 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM184AQ8NB25 1140 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 KLHDC9Q8NEP7 349 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GOT1L1Q8NHS2 421 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SEPT1Q8WYJ6 367 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GTF3C6Q969F1 213 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM47Q9BQJ4 181 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FUZQ9BT04 418 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TRMOQ9BU70 441 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 POLR3CQ9BUI4 534 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CTDSP1Q9GZU7 261 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 COPS7BQ9H9Q2 264 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC28A3Q9HAS3 691 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PDRG1Q9NUG6 133 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GIMAP4Q9NUV9 329 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 RMND1Q9NWS8 449 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ERAP1Q9NZ08 941 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC23A1Q9UHI7 598 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GMEB2Q9UKD1 530 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SNX14Q9Y5W7 946 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PIAS3Q9Y6X2 628 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CLRN2A0PK11 232 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM247A6NEH6 219 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 LINC01548A6NM66 108 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 KLRF2D3W0D1 207 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 INPPL1O15357 1258 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC16A5O15375 505 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 LPXNO60711 386 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 YEATS4O95619 227 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 EBLN1P0CF75 366 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CTPS1P17812 591 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MATN1P21941 496 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 AVPR2P30518 371 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CAPZA1P52907 286 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 COPB1P53618 953 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 EFNB1P98172 346 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TFF2Q03403 129 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CDK18Q07002 472 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SIGLEC14Q08ET2 396 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 IKQ13123 557 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 THOC5Q13769 683 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 PTK6Q13882 451 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 RCN2Q14257 317 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 DCAF4L1Q3SXM0 396 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GXYLT1Q4G148 440 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TREML2Q5T2D2 321 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM102AQ5T9C2 384 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 C6orf163Q5TEZ5 329 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGEF16Q5VV41 709 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SNX30Q5VWJ9 437 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 FCRL6Q6DN72 434 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM65Q6PI78 240 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 DHRS13Q6UX07 377 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TRIM72Q6ZMU5 477 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SLFN11Q7Z7L1 901 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MON1AQ86VX9 555 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 HERC6Q8IVU3 1022 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CEP97Q8IW35 865 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ZCCHC9Q8N567 271 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GDPD5Q8WTR4 605 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 C2orf15Q8WU43 125 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SEPT8Q92599 483 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 KIFAP3Q92845 792 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 SYAP1Q96A49 352 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 KTI12Q96EK9 354 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 INPP4AQ96PE3 977 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MAP7D2Q96T17 732 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 GAD1Q99259 594 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 MESP1Q9BRJ9 268 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 H2AFJQ9BTM1 129 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 ITPAQ9BY32 194 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM39BQ9GZU3 492 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CHMP1AQ9HD42 196 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 DNMT3BQ9UBC3 853 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms