RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 KRT33BQ14525 404 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 SYT16Q17RD7 645 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 NADSYN1Q6IA69 706 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 RAD9BQ6WBX8 426 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 ARMC9Q7Z3E5 817 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 TMPRSS12Q86WS5 348 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 MCEMP1Q8IX19 187 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 C1orf87Q8N0U7 546 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF441Q8N8Z8 693 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 C9orf106Q8NAJ2 232 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 BBS10Q8TAM1 723 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 PRPF31Q8WWY3 499 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 FIG4Q92562 907 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 MARK4Q96L34 752 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF385AQ96PM9 386 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 HGH1Q9BTY7 390 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 APOL6Q9BWW8 343 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 KLHL4Q9C0H6 718 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 CSTL1Q9H114 145 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 NKIRAS2Q9NYR9 191 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 TAS2R14Q9NYV8 317 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 CPSF2Q9P2I0 782 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 OR2W1Q9Y3N9 320 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 TTLL3Q9Y4R7 772 aa5.46□□□□□ -1.54
SMARCE1-219ENST00000583294 SAA2-SAA4A0A096LPE2 208 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 LNP1A1A4G5 178 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 PROB1E7EW31 1015 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 CLGNO14967 610 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 SLC16A5O15375 505 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 ZWINTO95229 277 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 CENPBP07199 599 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 PRLRP16471 622 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 NMBRP28336 390 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 AMPHP49418 695 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 KRTAP10-9P60411 292 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 RELQ04864 619 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 IZUMO4Q1ZYL8 232 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 KIF19Q2TAC6 998 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 GPR139Q6DWJ6 353 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 PRSS57Q6UWY2 283 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 GFRALQ6UXV0 394 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 TPRG1Q6ZUI0 275 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 C16orf82Q7Z2V1 217 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 SFR1Q86XK3 245 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 TMEM219Q86XT9 240 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 DNAAF5Q86Y56 855 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 PM20D2Q8IYS1 436 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 SLC5A8Q8N695 610 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 SLC38A9Q8NBW4 561 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 BICD1Q96G01 975 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 GCNAQ96QF7 691 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 CDRT15Q96T59 188 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 RTN4RQ9BZR6 473 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 HACL1Q9UJ83 578 aa5.45□□□□□ -1.54
SMARCE1-219ENST00000583294 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 C4orf47A7E2U8 309 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 CAMTA2O94983 1202 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 PPP1R3DO95685 299 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 BCL10O95999 233 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 ADRB2P07550 413 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 HSP90AA1P07900 732 aaKnown RBP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 NR2F1P10589 423 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 DAOP14920 347 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 ART1P52961 327 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 CXCL9Q07325 125 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 GRAPQ13588 217 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 MVPQ14764 893 aaKnown RBP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 FAM98BQ52LJ0 330 aaKnown RBP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 TMEM35AQ53FP2 167 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 ZDHHC20Q5W0Z9 365 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 PRAG1Q86YV5 1406 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 GALNT13Q8IUC8 556 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 LSMEM1Q8N8F7 131 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 MCUQ8NE86 351 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 THAP6Q8TBB0 222 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 ERP27Q96DN0 273 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 CDCA5Q96FF9 252 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 LRMDAQ9H2I8 198 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 C6orf106Q9H6K1 298 aaPredicted RBP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 UBTD1Q9HAC8 227 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 CHMP1AQ9HD42 196 aaPredicted RBP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 TMEM30AQ9NV96 361 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 TRMT1Q9NXH9 659 aaKnown RBP5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 PSD3Q9NYI0 1048 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 KLHL9Q9P2J3 617 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 POLG2Q9UHN1 485 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF148Q9UQR1 794 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 PCDHGB1Q9Y5G3 927 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 FAM169AQ9Y6X4 670 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 PASKQ96RG2 1323 aa5.44□□□□□ -1.54
SMARCE1-219ENST00000583294 A0A1W2PP11 408 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 PLSCR5A0PG75 271 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 MAGEA13PA6NCF6 341 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 LILRA5A6NI73 299 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 GLOD5A6NK44 160 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 TMEM178BH3BS89 294 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 PLK4O00444 970 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 TIMM44O43615 452 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms