RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CYP2R1Q6VVX0 501 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 FRA10AC1Q70Z53 315 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 GAB3Q8WWW8 586 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 ZFRQ96KR1 1074 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 CNBD2Q96M20 576 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 TNKS2Q9H2K2 1166 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 MRPL17Q9NRX2 175 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 CHD5Q8TDI0 1954 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 ATP6V1G1O75348 118 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 EFEMP2O95967 443 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 EMP3P54852 163 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 MYBPC1Q00872 1141 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 AARS2Q5JTZ9 985 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 GPSM1Q86YR5 675 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 TTC30BQ8N4P2 665 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 PRPF18Q99633 342 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 HGH1Q9BTY7 390 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 MRGBPQ9NV56 204 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 SPG21Q9NZD8 308 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 EIF2B4Q9UI10 523 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 CROTQ9UKG9 612 aa13.55□□□□□ -0.24
SRSF1-205ENST00000582730 OAS3Q9Y6K5 1087 aaKnown RBP13.55□□□□□ -0.24
SRSF1-205ENST00000582730 C1orf232A0A0U1RR37 186 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 TEX28O15482 410 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 COQ9O75208 318 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 TMED1Q13445 227 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 RAB33AQ14088 237 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 RARS2Q5T160 578 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 PTRHD1Q6GMV3 140 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 DUS1LQ6P1R4 473 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 CD200R1Q8TD46 325 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 KLHL32Q96NJ5 620 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 TUBB1Q9H4B7 451 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 Q9H521 79 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 SPAG4Q9NPE6 437 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 CFAP97Q9P2B7 532 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 POLG2Q9UHN1 485 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 DMTF1Q9Y222 760 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 AP4B1Q9Y6B7 739 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 ANKRD36A6QL64 1941 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 SLC7A2P52569 658 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 LRP8Q14114 963 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 HABP4Q5JVS0 413 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 MRPS31Q92665 395 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 CCDC97Q96F63 343 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
SRSF1-205ENST00000582730 CDK15Q96Q40 435 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 TIMMDC1Q9NPL8 285 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 HACD3Q9P035 362 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
SRSF1-205ENST00000582730 ANGPT2O15123 496 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 BCAS2O75934 225 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 PRAMEF1O95521 474 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 SLC5A2P31639 672 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 KANK2Q63ZY3 851 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 RETSATQ6NUM9 610 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 MIER2Q8N344 545 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 ACOX2Q99424 681 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 C2orf49Q9BVC5 232 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 C6orf203Q9P0P8 240 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 PRORSD1PA6NEY8 169 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 MAGEB3O15480 346 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 TNFAIP8O95379 198 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 LBPP18428 481 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 CASP2P42575 452 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 PPP3CCP48454 512 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 DCTN2Q13561 401 aaKnown RBP13.53□□□□□ -0.24
SRSF1-205ENST00000582730 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 ITIH5Q86UX2 942 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 FUNDC1Q8IVP5 155 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 BBS7Q8IWZ6 715 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 GALNT4Q8N4A0 578 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 DCAF4L2Q8NA75 395 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 EID2BQ96D98 161 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 HBEGFQ99075 208 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 C1orf50Q9BV19 199 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 IL17CQ9P0M4 197 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 OGDHLQ9ULD0 1010 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 RAB26Q9ULW5 256 aa13.53□□□□□ -0.24
SRSF1-205ENST00000582730 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms