RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZNF711Q9Y462 761 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 PCYT1BQ9Y5K3 369 aaPredicted RBP3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 ST14Q9Y5Y6 855 aa3.78□□□□□ -1.8
SMARCE1-215ENST00000578995 TRBV5-4A0A0C4DH59 114 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LNP1A1A4G5 178 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 IGLON5A6NGN9 336 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ERI2A8K979 691 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 E7ESA3 106 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 H3BS24 57 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 H7C0S8 307 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CDX4O14627 284 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DNALI1O14645 258 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TTI1O43156 1089 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR39O43194 453 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RAD51CO43502 376 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SGTAO43765 313 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RNASEH1O60930 286 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ANXA9O76027 345 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RECQL5O94762 991 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SEC31AO94979 1220 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CLDN7O95471 211 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 KRT14P02533 472 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TUBB4AP04350 444 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 FGF1P05230 155 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF30P17039 623 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 BPIP17213 487 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 HLA-DPA1P20036 260 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 MSNP26038 577 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CD27P26842 260 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TEAD1P28347 426 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CASQ1P31415 396 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 HOXD12P35452 270 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DEKP35659 375 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 HMGCLP35914 325 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TRIM23P36406 574 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 FDFT1P37268 417 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 MPLP40238 635 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CTSKP43235 329 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RPL21P46778 160 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SPINT3P49223 89 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LIG3P49916 1009 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 GEMP55040 296 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CLDN2P57739 230 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DCDC1P59894 354 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RPS21P63220 83 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 MRPS25P82663 173 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RPL6Q02878 288 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RAD51Q06609 339 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DPTQ07507 201 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ELP6Q0PNE2 266 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PEX6Q13608 980 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DHX34Q14147 1143 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SIM2Q14190 667 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RTP5Q14D33 572 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 IRF4Q15306 451 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TRIP13Q15645 432 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LPAL2Q16609 132 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 WHAMMP3Q1A5X7 153 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SPRED3Q2MJR0 410 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF658BQ4V348 819 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 KHDC1Q4VXA5 237 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ODF2Q5BJF6 829 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CRB2Q5IJ48 1285 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SYCP2LQ5T4T6 812 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 UBAP2Q5T6F2 1119 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 CCDC181Q5TID7 509 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LYSMD4Q5XG99 296 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ITPRIPL1Q6GPH6 555 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LAIR1Q6GTX8 287 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TCEAL6Q6IPX3 200 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 NAPEPLDQ6IQ20 393 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 HIBCHQ6NVY1 386 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ESRP1Q6NXG1 681 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 FBXL19Q6PCT2 694 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZC3H14Q6PJT7 736 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 KYAT3Q6YP21 454 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 Q6ZVL8 140 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ARMCX6Q7L4S7 300 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 THAP5Q7Z6K1 395 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TTC7BQ86TV6 843 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 C11orf74Q86VG3 221 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 IGDCC3Q8IVU1 814 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LILRA2Q8N149 483 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 BBS5Q8N3I7 341 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 MPP5Q8N3R9 675 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RYBPQ8N488 228 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 MMGT1Q8N4V1 131 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZCCHC9Q8N567 271 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DCLK2Q8N568 766 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TAB3Q8N5C8 712 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SYT8Q8NBV8 401 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR26Q8NDV2 337 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 MCUQ8NE86 351 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 IPMKQ8NFU5 416 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 OR52K1Q8NGK4 314 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 OR13J1Q8NGT2 312 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 OR14C36Q8NHC7 312 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DTX3LQ8TDB6 740 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 NSMCE1Q8WV22 266 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms