RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 OR6C4Q8NGE1 309 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 RNF139Q8WU17 664 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 COQ10AQ96MF6 247 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 KCTD7Q96MP8 289 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 FUZQ9BT04 418 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 ZYG11BQ9C0D3 744 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 TNFRSF10DQ9UBN6 386 aa4.4□□□□□ -1.71
CDH8-205ENST00000577730 PRAMEF22A3QJZ6 481 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PPEF1O14829 653 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 RGS14O43566 566 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ERVK-10P10266 1014 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ZNF35P13682 527 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 HNRNPLP14866 589 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDH8-205ENST00000577730 JUPP14923 745 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RPL17P18621 184 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 UBA1P22314 1058 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 GCNT1Q02742 428 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SREBF2Q12772 1141 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 DSG2Q14126 1118 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 GRM2Q14416 872 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MAPKAPK3Q16644 382 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 GNASQ5JWF2 1037 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC25A24Q6NUK1 477 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 FBXO42Q6P3S6 717 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ATG9AQ7Z3C6 839 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 METTL23Q86XA0 190 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 DNAJC10Q8IXB1 793 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 FTMTQ8N4E7 242 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ST8SIA2Q92186 375 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLCO2A1Q92959 643 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MMP19Q99542 508 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RIOK2Q9BVS4 552 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 KCNN2Q9H2S1 579 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ATP13A2Q9NQ11 1180 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 FAM217BQ9NTX9 383 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 CD300AQ9UGN4 299 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 USP18Q9UMW8 372 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 OR6C65A6NJZ3 312 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 HACD1B0YJ81 288 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ISM1B1AKI9 464 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PER2O15055 1255 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RASAL1O95294 804 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 HPRP00739 348 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 DLDP09622 509 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 OR56A5P0C7T3 313 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CERS1P27544 350 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ELK4P28324 431 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ACADLP28330 430 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 LEPRP48357 1165 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 YWHAZP63104 245 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 SPIBQ01892 262 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ADAM15Q13444 863 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 DUSP6Q16828 381 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC9B1Q4ZJI4 515 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CRTC2Q53ET0 693 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 PIGGQ5H8A4 983 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PIK3R6Q5UE93 754 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PGAP1Q75T13 922 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 APTXQ7Z2E3 356 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 PIWIL3Q7Z3Z3 882 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 PGBD3Q8N328 593 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RBPMSQ93062 196 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 CPB2Q96IY4 423 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 MUS81Q96NY9 551 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SLC38A2Q96QD8 506 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 WACQ9BTA9 647 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 IFT27Q9BW83 186 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TM9SF3Q9HD45 589 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 IL1RAPQ9NPH3 570 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RAD18Q9NS91 495 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SMOXQ9NWM0 555 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 GTF2A1LQ9UNN4 478 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CLCA3PQ9Y6N3 262 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CUL7Q14999 1698 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 TCRBV7S2A1N4TA0A589 114 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 A8MX80 341 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 GRAP2O75791 330 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 IL18RAPO95256 599 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 NDST3O95803 873 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 ARF4P18085 180 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 KDELR1P24390 212 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 RPS5P46782 204 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 MC2RQ01718 297 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 EXOC3L2Q2M3D2 409 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 USP30Q70CQ3 517 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SPATA19Q7Z5L4 167 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 LNX2Q8N448 690 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 LILRB1Q8NHL6 650 aaPredicted RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 RHOXF1Q8NHV9 184 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 PHF10Q8WUB8 498 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 ST8SIA4Q92187 359 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 CPT1BQ92523 772 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 NR4A3Q92570 626 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 SGK3Q96BR1 496 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 DPYSL5Q9BPU6 564 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 C7orf50Q9BRJ6 194 aaKnown RBP4.39□□□□□ -1.71
CDH8-205ENST00000577730 TRAF6Q9Y4K3 522 aa4.39□□□□□ -1.71
CDH8-205ENST00000577730 HEMK1Q9Y5R4 338 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms