RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 OR51F1A6NGY5 319 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 TTI1O43156 1089 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 AVILO75366 819 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 ACP5P13686 325 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 ACTR1BP42025 376 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 CDKN1CP49918 316 aaPredicted RBP15.61■□□□□ 0.09
CHD3-215ENST00000572750 ACTR1AP61163 376 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 MRPS25P82663 173 aaKnown RBP15.61■□□□□ 0.09
CHD3-215ENST00000572750 ZRANB3Q5FWF4 1079 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 LDLRAP1Q5SW96 308 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 TSTD2Q5T7W7 516 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 LRRC8BQ6P9F7 803 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 ARL10Q8N8L6 244 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 FAM181AQ8N9Y4 354 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 FAM46DQ8NEK8 389 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 SCG3Q8WXD2 468 aaKnown RBP15.61■□□□□ 0.09
CHD3-215ENST00000572750 ZNF592Q92610 1267 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 RUNDC3BQ96NL0 473 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 C19orf43Q9BQ61 176 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 RMI1Q9H9A7 625 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 TAAR2Q9P1P5 351 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 KCNK6Q9Y257 313 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 SLC30A1Q9Y6M5 507 aa15.61■□□□□ 0.09
CHD3-215ENST00000572750 CCDC162PA2VCL2 907 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 H7C0S8 307 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 GRID2O43424 1007 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 VEGFDO43915 354 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CDK14O94921 469 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CKMT1AP12532 417 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CKMT2P17540 419 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 ADRA1DP25100 572 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CTSCP53634 463 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 TMEM115Q12893 351 aaPredicted RBP15.6■□□□□ 0.09
CHD3-215ENST00000572750 GTF2H3Q13889 308 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 LRP8Q14114 963 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 NR0B2Q15466 257 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 SKIDA1Q1XH10 827 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 RNASEH2BQ5TBB1 312 aaKnown RBP15.6■□□□□ 0.09
CHD3-215ENST00000572750 GUSBP11Q6P575 273 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 LVRNQ6Q4G3 990 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 DET1Q7L5Y6 550 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 SNX20Q7Z614 316 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CAND1Q86VP6 1230 aaKnown RBP15.6■□□□□ 0.09
CHD3-215ENST00000572750 TRAPPC5Q8IUR0 188 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 ZNF547Q8IVP9 402 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 NXPE1Q8N323 547 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 MPP5Q8N3R9 675 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 SDR16C5Q8N3Y7 309 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 NAT8LQ8N9F0 302 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 SPATA4Q8NEY3 305 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CDKN2AIPNLQ96HQ2 116 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 SERPINB12Q96P63 405 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 ZCCHC2Q9C0B9 1178 aaKnown RBP15.6■□□□□ 0.09
CHD3-215ENST00000572750 IL22Q9GZX6 179 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 DPEP2Q9H4A9 486 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 CHRAC1Q9NRG0 131 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 SPATS2LQ9NUQ6 558 aaKnown RBP15.6■□□□□ 0.09
CHD3-215ENST00000572750 GULP1Q9UBP9 304 aa15.6■□□□□ 0.09
CHD3-215ENST00000572750 APOBEC2Q9Y235 224 aaKnown RBP15.6■□□□□ 0.09
CHD3-215ENST00000572750 APC2O95996 2303 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 PTPRBP23467 1997 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 OR2AG2A6NM03 316 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 GPR89AB7ZAQ6 455 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 DNALI1O14645 258 aaPredicted RBP15.59■□□□□ 0.09
CHD3-215ENST00000572750 CHUKO15111 745 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 RFPL3O75679 317 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 GPR89BP0CG08 455 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 ACP1P24666 158 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 PSMA3P25788 255 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 SARNPP82979 210 aaKnown RBP15.59■□□□□ 0.09
CHD3-215ENST00000572750 SMAD1Q15797 465 aaKnown RBP15.59■□□□□ 0.09
CHD3-215ENST00000572750 INSCQ1MX18 579 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 PCID2Q5JVF3 399 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 IZUMO3Q5VZ72 239 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 SYDE1Q6ZW31 735 aaPredicted RBP15.59■□□□□ 0.09
CHD3-215ENST00000572750 LRRTM4Q86VH4 590 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 PIANPQ8IYJ0 282 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 RASGEF1AQ8N9B8 481 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 PATE1Q8WXA2 126 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 HDAC10Q969S8 669 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 ULK4Q96C45 1275 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 TTC25Q96NG3 672 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 BFARQ9NZS9 450 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 ZNF462Q96JM2 2506 aa15.59■□□□□ 0.09
CHD3-215ENST00000572750 TRBV5-4A0A0C4DH59 114 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 CPED1A4D0V7 1026 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 AGAP14A8MT82 685 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 AP3B1O00203 1094 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 NOBOXO60393 691 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 URI1O94763 535 aaPredicted RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 DKK1O94907 266 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 EML2O95834 649 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 GOT2P00505 430 aaKnown RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 MSH3P20585 1137 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 ACRV1P26436 265 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 NMBRP28336 390 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 FOXN2P32314 431 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 NPY2RP49146 381 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 MAZP56270 477 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms