RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPAIN-209ENST00000571558 B4GALT6Q9UBX8 382 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 KCTD3Q9Y597 815 aa13.65□□□□□ -0.22
RPAIN-209ENST00000571558 HEMK1Q9Y5R4 338 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-209ENST00000571558 SCAMP1O15126 338 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 RIPK2O43353 540 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PIAS2O75928 621 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 USP1O94782 785 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 CRTAMO95727 393 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 C1QAP02745 245 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 GSTA2P09210 222 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 THEGLP0DJG4 465 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 NMBRP28336 390 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 MAT2AP31153 395 aaKnown RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 VIPR1P32241 457 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 HSD17B3P37058 310 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 INHBCP55103 352 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 TAS2R38P59533 333 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 RALGDSQ12967 914 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 SEPT6Q14141 434 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 FRG1Q14331 258 aaKnown RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 CRYMQ14894 314 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ESRP1Q6NXG1 681 aaKnown RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 CES3Q6UWW8 571 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 DPPA4Q7L190 304 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 NLRP9Q7RTR0 991 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 DCP2Q8IU60 420 aaKnown RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ARL14Q8N4G2 192 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PEX13Q92968 403 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 RAB7BQ96AH8 199 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 MFSD3Q96ES6 412 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 C19orf43Q9BQ61 176 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 FUT8Q9BYC5 575 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ARFGAP3Q9NP61 516 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 SAMD15Q9P1V8 674 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 SLC2A6Q9UGQ3 507 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 FADS3Q9Y5Q0 445 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 FAM169AQ9Y6X4 670 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 AP1G1O43747 822 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 CLDN7O95471 211 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 POLBP06746 335 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ABHD2P08910 425 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 GIMD1P0DJR0 217 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 SFTPCP11686 197 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 LPOP22079 712 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ARNTP27540 789 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 SSTR1P30872 391 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 HMGCLP35914 325 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ARCN1P48444 511 aaKnown RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 HNRNPKP61978 463 aaKnown RBP eCLIP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PTSQ03393 145 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PTPRCAPQ14761 206 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 SPANXN3Q5MJ09 141 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 LRRC66Q68CR7 880 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 CYS1Q717R9 158 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PRICKLE2Q7Z3G6 844 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PALM2Q8IXS6 379 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 PAF1Q8N7H5 531 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 WDR48Q8TAF3 677 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 MAPK15Q8TD08 544 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 CFAP36Q96G28 342 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 DYRK4Q9NR20 520 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 NLE1Q9NVX2 485 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-209ENST00000571558 UCKL1Q9NWZ5 548 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 MOCS1Q9NZB8 636 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 ITM2BQ9Y287 266 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 RPS6KL1Q9Y6S9 549 aa13.64□□□□□ -0.23
RPAIN-209ENST00000571558 COL12A1Q99715 3063 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 BOD1L1Q8NFC6 3051 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 C1orf232A0A0U1RR37 186 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 A8MX80 341 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 FFAR2O15552 330 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 BUD23O43709 281 aaKnown RBP13.63□□□□□ -0.23
RPAIN-209ENST00000571558 SPAG6O75602 509 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 TCEA3O75764 348 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ACSL3O95573 720 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ZNF30P17039 623 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 GM2AP17900 193 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 NFKBIAP25963 317 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ARSDP51689 593 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 STC1P52823 247 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 PDE1BQ01064 536 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ELP6Q0PNE2 266 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 SLC29A2Q14542 456 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 CNGA3Q16281 694 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 TMEM52BQ4KMG9 183 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ZCCHC8Q6NZY4 707 aaKnown RBP13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ERAP2Q6P179 960 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 C3orf62Q6ZUJ4 267 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 CLEC14AQ86T13 490 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 UNC5BQ8IZJ1 945 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms