RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CAPZA1P52907 286 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 THOC5Q13769 683 aaKnown RBP4.74□□□□□ -1.65
CHD9-220ENST00000569794 PKP1Q13835 747 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 FRG1Q14331 258 aaKnown RBP4.74□□□□□ -1.65
CHD9-220ENST00000569794 DPCR1Q3MIW9 517 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 TBC1D3GQ6DHY5 549 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 TBC1D3CQ6IPX1 549 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 IRGCQ6NXR0 463 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 KBTBD6Q86V97 674 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 TICAM1Q8IUC6 712 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 TBC1D3Q8IZP1 549 aaPredicted RBP4.74□□□□□ -1.65
CHD9-220ENST00000569794 HORMAD2Q8N7B1 307 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 PTGR2Q8N8N7 351 aaPredicted RBP4.74□□□□□ -1.65
CHD9-220ENST00000569794 IL17RCQ8NAC3 791 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 DUSP19Q8WTR2 217 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 ARRDC3Q96B67 414 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 RNFT2Q96EX2 444 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 C1orf74Q96LT6 269 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 DGAT2Q96PD7 388 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 FERMT1Q9BQL6 677 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 POLR1BQ9H9Y6 1135 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 IL1RAPL2Q9NP60 686 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 SPATS2LQ9NUQ6 558 aaKnown RBP4.74□□□□□ -1.65
CHD9-220ENST00000569794 ABCB8Q9NUT2 735 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 CDH22Q9UJ99 828 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 LAMP5Q9UJQ1 280 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 TUBE1Q9UJT0 475 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 TRPC5Q9UL62 973 aaPredicted RBP4.74□□□□□ -1.65
CHD9-220ENST00000569794 SLC12A4Q9UP95 1085 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 OSGIN2Q9Y236 505 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 ZBTB1Q9Y2K1 713 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 ADAM18Q9Y3Q7 739 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 KIF3AQ9Y496 699 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 ATAD2BQ9ULI0 1458 aa4.74□□□□□ -1.65
CHD9-220ENST00000569794 OR6C76A6NM76 312 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 TEX22C9J3V5 150 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 K7EPI3 171 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 DNM1LO00429 736 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 PSMD14O00487 310 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 TADA2AO75478 443 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 BCAS2O75934 225 aaPredicted RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 OR2C1O95371 312 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 GCNT3O95395 438 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 IFNB1P01574 187 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 FYNP06241 537 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 INHBAP08476 426 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 UNGP13051 313 aaPredicted RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 GM2AP17900 193 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 HOXC8P31273 242 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 PSMC4P43686 418 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 PCP4P48539 62 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 BMXP51813 675 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SH3BGRP55822 239 aaPredicted RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 FAM3BP58499 235 aaPredicted RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 SLC26A5P58743 744 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 HTD2P86397 168 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 CEBPZQ03701 1054 aaKnown RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 ALCAMQ13740 583 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 OASLQ15646 514 aaKnown RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 TYSND1Q2T9J0 566 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 ALG11Q2TAA5 492 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 KBTBD12Q3ZCT8 623 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 CST9LP1Q5W188 147 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 PMS2CLQ68D20 193 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SMIM29Q86T20 159 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 HOOK3Q86VS8 718 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 LMNTD1Q8N9Z9 388 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 CADM4Q8NFZ8 388 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SLC2A12Q8TD20 617 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SLC35F5Q8WV83 523 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 CTNNBL1Q8WYA6 563 aaPredicted RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 FAM149B1Q96BN6 582 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 ZNF333Q96JL9 665 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 ADGRG7Q96K78 797 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SLC25A33Q9BSK2 321 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.73□□□□□ -1.65
CHD9-220ENST00000569794 CTDSP1Q9GZU7 261 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SLC5A7Q9GZV3 580 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 HIPK3Q9H422 1215 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 GAREM1Q9H706 876 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 ANO10Q9NW15 660 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 AATFQ9NY61 560 aaKnown RBP eCLIP4.73□□□□□ -1.65
CHD9-220ENST00000569794 FETUBQ9UGM5 382 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 ARMCX3Q9UH62 379 aaPredicted RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 AGO1Q9UL18 857 aaKnown RBP4.73□□□□□ -1.65
CHD9-220ENST00000569794 HPCAL4Q9UM19 191 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 AURKCQ9UQB9 309 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SMC3Q9UQE7 1217 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 MTMR6Q9Y217 621 aa4.73□□□□□ -1.65
CHD9-220ENST00000569794 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
CHD9-220ENST00000569794 IGHV4-28A0A0C4DH34 117 aa4.72□□□□□ -1.65
CHD9-220ENST00000569794 MBD3L5A6NJ08 208 aaPredicted RBP4.72□□□□□ -1.65
CHD9-220ENST00000569794 A6NL46 340 aa4.72□□□□□ -1.65
CHD9-220ENST00000569794 PES1O00541 588 aaKnown RBP4.72□□□□□ -1.65
CHD9-220ENST00000569794 LDLRAD4O15165 306 aa4.72□□□□□ -1.65
CHD9-220ENST00000569794 LMX1BO60663 402 aa4.72□□□□□ -1.65
CHD9-220ENST00000569794 APBB3O95704 486 aa4.72□□□□□ -1.65
CHD9-220ENST00000569794 PENKP01210 267 aaPredicted RBP4.72□□□□□ -1.65
CHD9-220ENST00000569794 MYZAPP0CAP1 466 aa4.72□□□□□ -1.65
CHD9-220ENST00000569794 GABRB1P18505 474 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms