RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 BPIFB4P59827 614 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 RHOAP61586 193 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 LRP8Q14114 963 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 CACHD1Q5VU97 1274 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 BRAT1Q6PJG6 821 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 PASD1Q8IV76 773 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 ZBTB2Q8N680 514 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 SIDT2Q8NBJ9 832 aaKnown RBP9.56□□□□□ -0.88
CAPN3-216ENST00000567071 ACRBPQ8NEB7 543 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 TFAP2BQ92481 460 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 CNDP1Q96KN2 507 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 CCDC42Q96M95 316 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 AGPAT1Q99943 283 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 ZSWIM1Q9BR11 485 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 SYT11Q9BT88 431 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 NLNQ9BYT8 704 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 FRMD8Q9BZ67 464 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-216ENST00000567071 PDCL3Q9H2J4 239 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 WDCPQ9H6R7 721 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 ZNF552Q9H707 407 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-216ENST00000567071 AKIRIN1Q9H9L7 192 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-216ENST00000567071 CCM2LQ9NUG4 571 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-216ENST00000567071 KCTD5Q9NXV2 234 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 MFHAS1Q9Y4C4 1052 aa9.56□□□□□ -0.88
CAPN3-216ENST00000567071 BZW2Q9Y6E2 419 aaKnown RBP9.56□□□□□ -0.88
CAPN3-216ENST00000567071 A0A087X0T9 212 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 GOLGA6CA6NDK9 693 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 GOLGA6BA6NDN3 693 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 TMCO5BA8MYB1 307 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 FOXO6A8MYZ6 492 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 DDX3XO00571 662 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAPN3-216ENST00000567071 SRGAP2O75044 1071 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 FAM228BP0C875 321 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 GOLGA6DP0CG33 693 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 CYLC1P35663 651 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-216ENST00000567071 FMO1Q01740 532 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 CDR2Q01850 454 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 ACY1Q03154 408 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 ACOX1Q15067 660 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 CEBPEQ15744 281 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 LONRF1Q17RB8 773 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 BRMS1LQ5PSV4 323 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 TMCO4Q5TGY1 634 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 ZNF354CQ86Y25 554 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 DNAAF5Q86Y56 855 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 TMEM126BQ8IUX1 230 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 DEFB106AQ8N104 65 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 C17orf53Q8N3J3 647 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-216ENST00000567071 ZNF606Q8WXB4 792 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 ZDHHC12Q96GR4 267 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 C18orf12Q96KH6 178 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 PCDHB18PQ96TA0 734 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 HERPUD2Q9BSE4 406 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 TBC1D10AQ9BXI6 508 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 ENKD1Q9H0I2 346 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 TKTL2Q9H0I9 626 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 CHST8Q9H2A9 424 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 SUV39H2Q9H5I1 410 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 GPAMQ9HCL2 828 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 GOLGA6AQ9NYA3 693 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 PADI2Q9Y2J8 665 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 PCDHGC4Q9Y5F7 938 aa9.55□□□□□ -0.88
CAPN3-216ENST00000567071 EPN1Q9Y6I3 576 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-216ENST00000567071 NCOA6Q14686 2063 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-216ENST00000567071 KIR2DS5A0A0G2JLQ3 304 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 A0A0G2JNG1 304 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 E5RJQ4 531 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 KIR2DS3K7RE56 304 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 PCDH17O14917 1159 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 HSF2BPO75031 334 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 TMCC1O94876 653 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 UBXN7O94888 489 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 IPO7O95373 1038 aaKnown RBP9.54□□□□□ -0.88
CAPN3-216ENST00000567071 CD160O95971 181 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 FUCA1P04066 466 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 HEXAP06865 529 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 GLI1P08151 1106 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 TYRP1P17643 537 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 NELFEP18615 380 aaKnown RBP9.54□□□□□ -0.88
CAPN3-216ENST00000567071 OTX2P32243 289 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 RPL34P49207 117 aaKnown RBP9.54□□□□□ -0.88
CAPN3-216ENST00000567071 ARL4DP49703 201 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 KIR2DS5Q14953 304 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 TLR1Q15399 786 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 HIF1AQ16665 826 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 ASTE1Q2TB18 679 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-216ENST00000567071 IRAK1BP1Q5VVH5 260 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 NAA35Q5VZE5 725 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 DENND1BQ6P3S1 775 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 DOK6Q6PKX4 331 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 LIPIQ6XZB0 460 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 PRSS42Q7Z5A4 293 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 GALNT13Q8IUC8 556 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 CCDC170Q8IYT3 715 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 CASKIN2Q8WXE0 1202 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 NUS1Q96E22 293 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 ARSGQ96EG1 525 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 MAGEB10Q96LZ2 347 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-216ENST00000567071 GBP5Q96PP8 586 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 ZNF559Q9BR84 538 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms