RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 DOK6Q6PKX4 331 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 CCDC25Q86WR0 208 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 GALNT13Q8IUC8 556 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 SLC25A41Q8N5S1 370 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 SCARF2Q96GP6 870 aaPredicted RBP13.3□□□□□ -0.28
CLK3-218ENST00000566926 SERPINB12Q96P63 405 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 PLEKHG4BQ96PX9 1271 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 OR2M4Q96R27 311 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 RUFY1Q96T51 708 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 AGAP2Q99490 1192 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
CLK3-218ENST00000566926 DPEP2Q9H4A9 486 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 SIRPGQ9P1W8 387 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 GPSM3Q9Y4H4 160 aa13.3□□□□□ -0.28
CLK3-218ENST00000566926 GPR89AB7ZAQ6 455 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 F5H423 210 aaPredicted RBP13.29□□□□□ -0.28
CLK3-218ENST00000566926 ZW10O43264 779 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 SLC25A14O95258 325 aaPredicted RBP13.29□□□□□ -0.28
CLK3-218ENST00000566926 TTC4O95801 387 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 MT-CO3P00414 261 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 GSTA2P09210 222 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 NUDT17P0C025 328 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 GPR89BP0CG08 455 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 MYF5P13349 255 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 PHBP35232 272 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 HSD17B3P37058 310 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 MAGEA3P43357 314 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 MAGEA4P43358 317 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 PDE1BQ01064 536 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 TCEA2Q15560 299 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 CCDC38Q502W7 563 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 ANKRD22Q5VYY1 191 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 KCTD11Q693B1 232 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 RANBP10Q6VN20 620 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 GLT6D1Q7Z4J2 308 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
CLK3-218ENST00000566926 GPR26Q8NDV2 337 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 GPR156Q8NFN8 814 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 DTX3LQ8TDB6 740 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 BLOC1S5Q8TDH9 187 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 UBLCP1Q8WVY7 318 aaPredicted RBP13.29□□□□□ -0.28
CLK3-218ENST00000566926 GRAMD1AQ96CP6 724 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 EID2BQ96D98 161 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 DEPDC7Q96QD5 511 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 FICDQ9BVA6 458 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
CLK3-218ENST00000566926 PPCSQ9HAB8 311 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 ZNF446Q9NWS9 450 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 TMEM98Q9Y2Y6 226 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 PKP3Q9Y446 797 aa13.29□□□□□ -0.28
CLK3-218ENST00000566926 ZNF106Q9H2Y7 1883 aaKnown RBP13.29□□□□□ -0.28
CLK3-218ENST00000566926 FAM149AA5PLN7 773 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 TRABD2BA6NFA1 517 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 C2orf81A6NN90 581 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 FADS2P1A8MWK0 482 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 TCEA3O75764 348 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 AGTP01019 485 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 PNLIPP16233 465 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 GLB1P16278 677 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 BPIP17213 487 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 CHRNA4P43681 627 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 POLD2P49005 469 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 CTBSQ01459 385 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 PDIA2Q13087 525 aaKnown RBP13.28□□□□□ -0.28
CLK3-218ENST00000566926 TARDBPQ13148 414 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLK3-218ENST00000566926 ST3GAL2Q16842 350 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 C14orf28Q4W4Y0 310 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 PYCR3Q53H96 274 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 KCTD16Q68DU8 428 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 PHYKPLQ8IUZ5 450 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 DCBLD1Q8N8Z6 715 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 KYQ8NBH2 561 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 PYROXD1Q8WU10 500 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 GLYATL1Q969I3 302 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 NXPE2Q96DL1 559 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 VPS35Q96QK1 796 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 NRSN2Q9GZP1 204 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
CLK3-218ENST00000566926 CCDC86Q9H6F5 360 aaKnown RBP13.28□□□□□ -0.28
CLK3-218ENST00000566926 TRIM39Q9HCM9 518 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 SAYSD1Q9NPB0 183 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 IL17CQ9P0M4 197 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 TAAR2Q9P1P5 351 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 ZNHIT2Q9UHR6 403 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 CNOT6Q9ULM6 557 aaKnown RBP13.28□□□□□ -0.28
CLK3-218ENST00000566926 SPO11Q9Y5K1 396 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 AKAP13Q12802 2813 aa13.28□□□□□ -0.28
CLK3-218ENST00000566926 KIF26BQ2KJY2 2108 aa13.27□□□□□ -0.28
CLK3-218ENST00000566926 CACNA1BQ00975 2339 aa13.27□□□□□ -0.28
CLK3-218ENST00000566926 IGF2RP11717 2491 aa13.27□□□□□ -0.29
CLK3-218ENST00000566926 TCRBV7S3A2A0A539 114 aa13.27□□□□□ -0.29
CLK3-218ENST00000566926 MAGEB16A2A368 324 aa13.27□□□□□ -0.29
CLK3-218ENST00000566926 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
CLK3-218ENST00000566926 B4DGG1 531 aa13.27□□□□□ -0.29
CLK3-218ENST00000566926 GOLGA8MH3BSY2 632 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms