RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PSMD7P51665 324 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 YBEYP58557 167 aaPredicted RBP21.4■■□□□ 1.02
SPSB3-208ENST00000566339 DSC2Q02487 901 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 SLC10A7Q0GE19 358 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 RABL3Q5HYI8 236 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 PAGE3Q5JUK9 113 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 SCD5Q86SK9 330 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 PJA1Q8NG27 643 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 SDCCAG3Q96C92 435 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 HMCESQ96FZ2 354 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 UROC1Q96N76 676 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 ING2Q9H160 280 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 GORASP2Q9H8Y8 452 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 CRYL1Q9Y2S2 319 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 ZNF711Q9Y462 761 aa21.4■■□□□ 1.02
SPSB3-208ENST00000566339 H0Y858 1186 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 M0QZ92 97 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 KPNA4O00629 521 aaPredicted RBP21.39■■□□□ 1.01
SPSB3-208ENST00000566339 GMNNO75496 209 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 SERPINB7O75635 380 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 SLC4A1P02730 911 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 CRHBPP24387 322 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 DIO3P55073 304 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 NEDD8Q15843 81 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 SMU1Q2TAY7 513 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 ANKDD1AQ495B1 522 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 ALG1LQ6GMV1 187 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 IFNL1Q8IU54 200 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 GLT1D1Q96MS3 346 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF347Q96SE7 839 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 POLR1EQ9GZS1 481 aaKnown RBP21.39■■□□□ 1.01
SPSB3-208ENST00000566339 RAD21L1Q9H4I0 556 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 RETREG1Q9H6L5 497 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 NTN4Q9HB63 628 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 TLR9Q9NR96 1032 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 MPP6Q9NZW5 540 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 PTPRDP23468 1912 aa21.39■■□□□ 1.01
SPSB3-208ENST00000566339 H3BMM5 538 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 UPK1AO00322 258 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PFDN6O15212 129 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 RPLP2P05387 115 aaKnown RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 CHRM3P20309 590 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 MATN1P21941 496 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 IGFBP6P24592 240 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 CHRNB3Q05901 458 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 TRAF2Q12933 501 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 BNIP3Q12983 259 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 IL18R1Q13478 541 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF846Q147U1 533 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PIK3R6Q5UE93 754 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 FAM43BQ6ZT52 329 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 RYBPQ8N488 228 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 ATP6V0D2Q8N8Y2 350 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 SNX19Q92543 992 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 EXT2Q93063 718 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PABPC5Q96DU9 382 aaKnown RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 NSUN5Q96P11 429 aaKnown RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 ZNF382Q96SR6 550 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 FANCEQ9HB96 536 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 TDRKHQ9Y2W6 561 aaKnown RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 NAALAD2Q9Y3Q0 740 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 TRPV2Q9Y5S1 764 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 COMMD10Q9Y6G5 202 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PPP6CO00743 305 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 GGT1P19440 569 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 XAF1Q6GPH4 301 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 AFTPHQ6ULP2 937 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 XKR5Q6UX68 686 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 LDB1Q86U70 411 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 MON1AQ86VX9 555 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 BTN2A3PQ96KV6 586 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 RNF145Q96MT1 663 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 MUS81Q96NY9 551 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 KCNA7Q96RP8 456 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 WDR12Q9GZL7 423 aaKnown RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 NLE1Q9NVX2 485 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-208ENST00000566339 DNAJB9Q9UBS3 223 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 GIMAP2Q9UG22 337 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PCTPQ9UKL6 214 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 SCML2Q9UQR0 700 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 BTRCQ9Y297 605 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PCDHGA4Q9Y5G9 962 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 PTGDR2Q9Y5Y4 395 aa21.38■■□□□ 1.01
SPSB3-208ENST00000566339 CROCCQ5TZA2 2017 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 ARL5CA6NH57 179 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 J3KR12 359 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 TBC1D4O60343 1298 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 ECI2O75521 394 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 RHOBTB1O94844 696 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 CLIC3O95833 236 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 ITIH1P19827 911 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 CD247P20963 164 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 SCNN1GP51170 649 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 MRPS6P82932 125 aaKnown RBP21.37■■□□□ 1.01
SPSB3-208ENST00000566339 PWP1Q13610 501 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 NR1D2Q14995 579 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 RNF165Q6ZSG1 346 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 TLK2Q86UE8 772 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 IFNEQ86WN2 208 aa21.37■■□□□ 1.01
SPSB3-208ENST00000566339 ZDHHC13Q8IUH4 622 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms