RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 LINGO3P0C6S8 592 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ACHEP22303 614 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 UGT1A1P22309 533 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ATP5DP30049 168 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 HOXC13P31276 330 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 FASLGP48023 281 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 SRSF1Q07955 248 aaKnown RBP eCLIP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 HNF4GQ14541 408 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ZNF273Q14593 569 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 MVPQ14764 893 aaKnown RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 SYT16Q17RD7 645 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 OTUD1Q5VV17 481 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ZDHHC20Q5W0Z9 365 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 C11orf88Q6PI97 169 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 CENPVQ7Z7K6 275 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 EMC1Q8N766 993 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 ZNF713Q8N859 430 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 IQUBQ8NA54 791 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 SLC38A9Q8NBW4 561 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 TBC1D16Q8TBP0 767 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 TAAR8Q969N4 342 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 SLC25A28Q96A46 364 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 NXNL1Q96CM4 212 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 PLAC1Q9HBJ0 212 aa4.97□□□□□ -1.61
CNOT1-209ENST00000566240 TMEM184BQ9Y519 407 aaPredicted RBP4.97□□□□□ -1.61
CNOT1-209ENST00000566240 TRAV34A0A0B4J273 112 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 ARHGEF37A1IGU5 675 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 NDUFS7O75251 213 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 MOSPD3O75425 235 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 LCATP04180 440 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 PRF1P14222 555 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 PCGF2P35227 344 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 SRSF4Q08170 494 aaKnown RBP4.96□□□□□ -1.62
CNOT1-209ENST00000566240 PPIGQ13427 754 aaKnown RBP eCLIP4.96□□□□□ -1.62
CNOT1-209ENST00000566240 CTF1Q16619 201 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 ODF3L2Q3SX64 289 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 FSCBQ5H9T9 825 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 DNTTIP2Q5QJE6 756 aaKnown RBP4.96□□□□□ -1.62
CNOT1-209ENST00000566240 TYW3Q6IPR3 259 aaKnown RBP4.96□□□□□ -1.62
CNOT1-209ENST00000566240 IRF2BP2Q7Z5L9 587 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 ZNF595Q8IYB9 648 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 NANOGP1Q8N7R0 232 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 ZNF548Q8NEK5 533 aaPredicted RBP4.96□□□□□ -1.62
CNOT1-209ENST00000566240 GDAP1Q8TB36 358 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 HMGCLL1Q8TB92 370 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 WDR20Q8TBZ3 569 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 ABHD6Q9BV23 337 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 C2orf40Q9H1Z8 148 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 EQTNQ9NQ60 294 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 B3GALT5Q9Y2C3 310 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 LIPGQ9Y5X9 500 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 POMT1Q9Y6A1 747 aa4.96□□□□□ -1.62
CNOT1-209ENST00000566240 IGHV4-28A0A0C4DH34 117 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 FAM90A26D6RGX4 464 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 TMEM189-UBE2V1I3L0A0 370 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 ANKRD28O15084 1053 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 ZBTB43O43298 467 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 SYNCRIPO60506 623 aaKnown RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 DDNO94850 711 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 SYF2O95926 243 aaKnown RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 SLPIP03973 132 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 OR52Z1P0C646 297 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 KRT2P35908 639 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MMP13P45452 471 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MXI1P50539 228 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 NUDT6P53370 316 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 TAS2R38P59533 333 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 RBPJQ06330 500 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MELKQ14680 651 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 PTPRCAPQ14761 206 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 SRSF7Q16629 238 aaKnown RBP eCLIP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 AMZ1Q400G9 498 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 FNBP1LQ5T0N5 605 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MPP7Q5T2T1 576 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 C18orf63Q68DL7 685 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 KRT39Q6A163 491 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 ZNF534Q76KX8 674 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 TMEM173Q86WV6 379 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MFN1Q8IWA4 741 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 CCAR2Q8N163 923 aaKnown RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 GCSAMQ8N6F7 178 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 AFAP1L1Q8TED9 768 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 WFIKKN2Q8TEU8 576 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 NLRP4Q96MN2 994 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MS4A10Q96PG2 267 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 MGME1Q9BQP7 344 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 TMEM79Q9BSE2 394 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 COPS7BQ9H9Q2 264 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 PRMT7Q9NVM4 692 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 CHCHD3Q9NX63 227 aaKnown RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 DNAJB9Q9UBS3 223 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 SLC24A2Q9UI40 661 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 FBXL2Q9UKC9 423 aa4.95□□□□□ -1.62
CNOT1-209ENST00000566240 ASTN2O75129 1339 aaPredicted RBP4.95□□□□□ -1.62
CNOT1-209ENST00000566240 A0A1W2PPM1 405 aa4.94□□□□□ -1.62
CNOT1-209ENST00000566240 RPS10-NUDT3A0A1W2PQS6 291 aa4.94□□□□□ -1.62
CNOT1-209ENST00000566240 SOCS6O14544 535 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms