RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 BRSK1Q8TDC3 778 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 VAT1Q99536 393 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 CTRCQ99895 268 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 EFHD1Q9BUP0 239 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 SLC12A9Q9BXP2 914 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 TRIT1Q9H3H1 467 aaKnown RBP13.15□□□□□ -0.3
HACD3-208ENST00000566239 TRABDQ9H4I3 376 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 POT1Q9NUX5 634 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.15□□□□□ -0.3
HACD3-208ENST00000566239 HACD3Q9P035 362 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 KLHL8Q9P2G9 620 aaPredicted RBP13.15□□□□□ -0.3
HACD3-208ENST00000566239 SAE1Q9UBE0 346 aaPredicted RBP13.15□□□□□ -0.3
HACD3-208ENST00000566239 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 DNAJC16Q9Y2G8 782 aa13.15□□□□□ -0.3
HACD3-208ENST00000566239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
HACD3-208ENST00000566239 MN1Q10571 1320 aaPredicted RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 TENM4Q6N022 2769 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 ZNF891A8MT65 544 aaPredicted RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 POLR1CO15160 346 aaPredicted RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 PPFIA2O75334 1257 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 MTX2O75431 263 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 UBXN7O94888 489 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
HACD3-208ENST00000566239 EPOP01588 193 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 AMD1P17707 334 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 NFKB1P19838 968 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 MAGEA1P43355 309 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 SEPT7Q16181 437 aaKnown RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 TAZQ16635 292 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 TRAPPC5Q8IUR0 188 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 CCDC50Q8IVM0 306 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 RBM12BQ8IXT5 1001 aaKnown RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 RNF214Q8ND24 703 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 HTR3CQ8WXA8 447 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 CXorf40BQ96DE9 158 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 CATSPER2Q96P56 530 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 ZCCHC2Q9C0B9 1178 aaKnown RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 GPN2Q9H9Y4 310 aaPredicted RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 BPIFA1Q9NP55 256 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 LUC7LQ9NQ29 371 aaKnown RBP13.14□□□□□ -0.31
HACD3-208ENST00000566239 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 SLC23A2Q9UGH3 650 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 SPO11Q9Y5K1 396 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
HACD3-208ENST00000566239 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 AURKAO14965 403 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 KCNJ13O60928 360 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 TYRP1P17643 537 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 RPL10P27635 214 aaKnown RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 SLC19A1P41440 591 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 HALP42357 657 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 WNT3AP56704 352 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 FOXM1Q08050 763 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 TMEM115Q12893 351 aaPredicted RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 AGAP9Q5VTM2 703 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 KDELC1Q6UW63 502 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 ABRAXAS1Q6UWZ7 409 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 PID1Q7Z2X4 250 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 GLT6D1Q7Z4J2 308 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 KATNAL2Q8IYT4 538 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 RCOR2Q8IZ40 523 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 DTX3LQ8TDB6 740 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 C9orf72Q96LT7 481 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 FCRL5Q96RD9 977 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 FSD1LQ9BXM9 530 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 WASH6PQ9NQA3 447 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 PKP3Q9Y446 797 aa13.13□□□□□ -0.31
HACD3-208ENST00000566239 TMEM184BQ9Y519 407 aaPredicted RBP13.13□□□□□ -0.31
HACD3-208ENST00000566239 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 HACD1B0YJ81 288 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 RASSF9O75901 435 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 STK17BO94768 372 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 C9P02748 559 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 ITGB6P18564 788 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 HLA-DPA1P20036 260 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 CD68P34810 354 aaPredicted RBP13.12□□□□□ -0.31
HACD3-208ENST00000566239 SPAM1P38567 509 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 CCR10P46092 362 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 DRG2P55039 364 aaKnown RBP13.12□□□□□ -0.31
HACD3-208ENST00000566239 GFERP55789 205 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 ABHD18Q0P651 414 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 TBX2Q13207 712 aaPredicted RBP13.12□□□□□ -0.31
HACD3-208ENST00000566239 MPP3Q13368 585 aa13.12□□□□□ -0.31
HACD3-208ENST00000566239 ITGA9Q13797 1035 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms