RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 UBE2IP63279 158 aaKnown RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 TLE4Q04727 773 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 CDC16Q13042 620 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 ATP1A4Q13733 1029 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 SYCP1Q15431 976 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 FIGNQ5HY92 759 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 DPY19L2P1Q6NXN4 242 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 IRGCQ6NXR0 463 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 SARM1Q6SZW1 724 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 TECPR1Q7Z6L1 1165 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 PHYKPLQ8IUZ5 450 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 UMODL1-AS1Q8N2C9 162 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 MSANTD4Q8NCY6 345 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 DNAJB14Q8TBM8 379 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 AP2M1Q96CW1 435 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 SLC41A2Q96JW4 573 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF514Q96K75 400 aaPredicted RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 PCMTD1Q96MG8 357 aaPredicted RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 TRAPPC9Q96Q05 1148 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 REPIN1Q9BWE0 567 aaKnown RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 NAA15Q9BXJ9 866 aaKnown RBP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 MAGEB5Q9BZ81 275 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 RAB33BQ9H082 229 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 ABCG8Q9H221 673 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 CATSPERBQ9H7T0 1116 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 SIX2Q9NPC8 291 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 SEMA5BQ9P283 1151 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 TMEM59LQ9UK28 342 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 DNAJC12Q9UKB3 198 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 KCNK6Q9Y257 313 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 PCSK5Q92824 1860 aa8.89□□□□□ -0.99
VPS9D1-205ENST00000565452 GOLGA8SH3BPF8 625 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 CCL21O00585 134 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 PRAMEF11O60813 436 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 JCHAINP01591 159 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 ACP5P13686 325 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 HADHAP40939 763 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 RGRP47804 291 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 SOX8P57073 446 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 AP1S1P61966 158 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 TUBB4BP68371 445 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 HSD11B2P80365 405 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 GPS2Q13227 327 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 TUBB2AQ13885 445 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 SSPNQ14714 243 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 KCNAB1Q14722 419 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 DCAF10Q5QP82 559 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 PLEKHS1Q5SXH7 462 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 B3GNTL1Q67FW5 361 aaPredicted RBP8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 FAM180AQ6UWF9 173 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 TRIM74Q86UV6 250 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 KMT5CQ86Y97 462 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 CEP97Q8IW35 865 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 RBM12BQ8IXT5 1001 aaKnown RBP8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 FAM71AQ8IYT1 594 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 NDUFAF2Q8N183 169 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 BCORP1Q8N888 145 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 RNF214Q8ND24 703 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 CHDHQ8NE62 594 aaPredicted RBP8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 FNIP1Q8TF40 1166 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 CPT1BQ92523 772 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 SPOCK2Q92563 424 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 CLIP3Q96DZ5 547 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 SCRN2Q96FV2 425 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 WDR77Q9BQA1 342 aaPredicted RBP8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 TUBB2BQ9BVA1 445 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 ATP13A2Q9NQ11 1180 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 IFNKQ9P0W0 207 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 VPS18Q9P253 973 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 NEU2Q9Y3R4 380 aa8.88□□□□□ -0.99
VPS9D1-205ENST00000565452 TRGV8A0A0C4DH27 118 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 IGHV5-51A0A0C4DH38 117 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 ARHGAP42A6NI28 874 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 FOXN3O00409 490 aaPredicted RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 DNAJC6O75061 913 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 EBLN1P0CF75 366 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 AGAP20933 346 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 SDC4P31431 198 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 OTX2P32243 289 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 PBX1P40424 430 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 SLC19A1P41440 591 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 CAPZBP47756 277 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 CLCNKAP51800 687 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 SMSP52788 366 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 POLR2FP61218 127 aaKnown RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 PPP2R2AP63151 447 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 OTUD4Q01804 1114 aaKnown RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 TRIM14Q14142 442 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 RFTN1Q14699 578 aaPredicted RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 CDO1Q16878 200 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 TMTC4Q5T4D3 741 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 KLHL35Q6PF15 583 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 TMEM207Q6UWW9 146 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF765Q7L2R6 523 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 TAOK1Q7L7X3 1001 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms