RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C3orf38Q5JPI3 329 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 GPRC6AQ5T6X5 926 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 KCTD11Q693B1 232 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 TMEM220Q6QAJ8 160 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 SPRED1Q7Z699 444 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 PIM3Q86V86 326 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 C17orf82Q86X59 251 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-206ENST00000564557 TRIM48Q8IWZ4 208 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
CNOT1-206ENST00000564557 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 ATXN7L3BQ96GX2 97 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-206ENST00000564557 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-206ENST00000564557 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 POLR1BQ9H9Y6 1135 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 ETNK1Q9HBU6 452 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
CNOT1-206ENST00000564557 KCNK4Q9NYG8 393 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 TBC1D29Q9UFV1 150 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 KCTD3Q9Y597 815 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 ENTPD2Q9Y5L3 495 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 ST14Q9Y5Y6 855 aa13.48□□□□□ -0.25
CNOT1-206ENST00000564557 CCDC187A0A096LP49 1063 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 A0A1W2PQM1 296 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 BRINP1O60477 761 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 CPNE6O95741 557 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 F3P13726 295 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 LSSP48449 732 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 CLCNKAP51800 687 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 HHEXQ03014 270 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 ZRANB3Q5FWF4 1079 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 PHF19Q5T6S3 580 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 DENND5AQ6IQ26 1287 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 DRICH1Q6PGQ1 229 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 IYDQ6PHW0 289 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 LRRC69Q6ZNQ3 347 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 USP53Q70EK8 1073 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 AMZ2Q86W34 360 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 KLHDC8BQ8IXV7 354 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 SFRP1Q8N474 314 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 DDHD1Q8NEL9 900 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 OR13C4Q8NGS5 318 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 OR10G6Q8NH81 332 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 SLC37A2Q8TED4 501 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 HEXDCQ8WVB3 486 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 C19orf43Q9BQ61 176 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 PRDM8Q9NQV8 689 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 PIH1D1Q9NWS0 290 aaKnown RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 ATXN7L1Q9ULK2 861 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 PCYT1BQ9Y5K3 369 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 DNMT3AQ9Y6K1 912 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-206ENST00000564557 CHD8Q9HCK8 2581 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 UNC13CQ8NB66 2214 aa13.47□□□□□ -0.25
CNOT1-206ENST00000564557 ZFC3H1O60293 1989 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 OR2AG2A6NM03 316 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 PPM1DO15297 605 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 RRP8O43159 456 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 POP7O75817 140 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 VIPP01282 170 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 APRTP07741 180 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 ETS1P14921 441 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 MC4RP32245 332 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 HALP42357 657 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 FASLGP48023 281 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 GPLD1P80108 840 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 B4GALNT1Q00973 533 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 EIF3IQ13347 325 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 NFATC2Q13469 925 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 CLPPQ16740 277 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 FNBP1LQ5T0N5 605 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 DET1Q7L5Y6 550 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 TAS2R42Q7RTR8 314 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 SNX20Q7Z614 316 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 SLC35F6Q8N357 371 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 FBXO39Q8N4B4 442 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 OR52K1Q8NGK4 314 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 STYXQ8WUJ0 223 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 FGF11Q92914 225 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 ZNF578Q96N58 590 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 DPYSL5Q9BPU6 564 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 KRTAP3-3Q9BYR6 98 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 KRTAP3-2Q9BYR7 98 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 RDH14Q9HBH5 336 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 SARS2Q9NP81 518 aaKnown RBP13.46□□□□□ -0.25
CNOT1-206ENST00000564557 THSD1Q9NS62 852 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 SMOXQ9NWM0 555 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 TMPRSS11EQ9UL52 423 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 RAXQ9Y2V3 346 aa13.46□□□□□ -0.25
CNOT1-206ENST00000564557 MAP1BP46821 2468 aaKnown RBP13.46□□□□□ -0.26
CNOT1-206ENST00000564557 HEATR9A2RTY3 570 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms