RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 APLP1P51693 650 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 IL2P60568 153 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 ECT2LQ008S8 904 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 GNA12Q03113 381 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 GRSF1Q12849 480 aaKnown RBP eCLIP12.96□□□□□ -0.34
USB1-207ENST00000563149 TAF10Q12962 218 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 MRPL58Q14197 206 aaKnown RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 MYBPC3Q14896 1274 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 CRY1Q16526 586 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 PTPRNQ16849 979 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 ATP6AP1LQ52LC2 224 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 AARS2Q5JTZ9 985 aaKnown RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 C6orf136Q5SQH8 315 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 CCNYL2Q5T2Q4 361 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 NADSYN1Q6IA69 706 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 IFNEQ86WN2 208 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 CIR1Q86X95 450 aaPredicted RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 ZNF280BQ86YH2 543 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 GPSM1Q86YR5 675 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 KIAA2013Q8IYS2 634 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 VPS33AQ96AX1 596 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 RMDN1Q96DB5 314 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 TEX37Q96LM6 180 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 NSMCE2Q96MF7 247 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 SLC30A3Q99726 388 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 NUDT4Q9NZJ9 180 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 UBA2Q9UBT2 640 aaPredicted RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 ZNF225Q9UK10 706 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 IKZF3Q9UKT9 509 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 FAF1Q9UNN5 650 aaPredicted RBP12.96□□□□□ -0.34
USB1-207ENST00000563149 SPO11Q9Y5K1 396 aa12.96□□□□□ -0.34
USB1-207ENST00000563149 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
USB1-207ENST00000563149 C9JVG2 144 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 KDELR3O43731 214 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 SYNCRIPO60506 623 aaKnown RBP12.95□□□□□ -0.34
USB1-207ENST00000563149 HMBSP08397 361 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 ZDHHC11BP0C7U3 371 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 CR2P20023 1033 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
USB1-207ENST00000563149 OR1G1P47890 313 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 CDH4P55283 916 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 YBX1P67809 324 aaKnown RBP12.95□□□□□ -0.34
USB1-207ENST00000563149 SMARCB1Q12824 385 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 FUT11Q495W5 492 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 CTXN3Q4LDR2 81 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 GLYATQ6IB77 296 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 LYSMD3Q7Z3D4 306 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 RIMKLAQ8IXN7 391 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 LGI2Q8N0V4 545 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 MDGA1Q8NFP4 955 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 PROKR1Q8TCW9 393 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 MIPOL1Q8TD10 442 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 KCNJ9Q92806 393 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 PDLIM5Q96HC4 596 aaKnown RBP12.95□□□□□ -0.34
USB1-207ENST00000563149 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 CHID1Q9BWS9 393 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 MUC3BQ9H195 1237 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 TBCCD1Q9NVR7 557 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 GALPQ9UBC7 116 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
USB1-207ENST00000563149 TNPO3Q9Y5L0 923 aaKnown RBP12.95□□□□□ -0.34
USB1-207ENST00000563149 SH3PXD2BA1X283 911 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 H7C0S8 307 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 E2F3O00716 465 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ACSL4O60488 711 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 DEAF1O75398 565 aaPredicted RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 SEC24DO94855 1032 aaPredicted RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 PRSS23O95084 383 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 CELF2O95319 508 aaKnown RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 TSPAN12O95859 305 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ALBP02768 609 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 PRSS56P0CW18 603 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 JUNBP17275 347 aaPredicted RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 HRH2P25021 359 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 PRDX3P30048 256 aaKnown RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 AGTR2P50052 363 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 PCBP2Q15366 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
USB1-207ENST00000563149 SMU1Q2TAY7 513 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 IL31Q6EBC2 164 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 SLC24A5Q71RS6 500 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 STK40Q8N2I9 435 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 FNDC5Q8NAU1 212 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 OR2T11Q8NH01 316 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 FNDC8Q8TC99 324 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 MAGEE2Q8TD90 523 aaPredicted RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 FBXL20Q96IG2 436 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 RPF2Q9H7B2 306 aaKnown RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 LIN28AQ9H9Z2 209 aaKnown RBP12.94□□□□□ -0.34
USB1-207ENST00000563149 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 CD274Q9NZQ7 290 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ST14Q9Y5Y6 855 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 CHD5Q8TDI0 1954 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 ENPP3O14638 875 aa12.94□□□□□ -0.34
USB1-207ENST00000563149 B4GALT3O60512 393 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms