RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 APCP25054 2843 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 IGHV5-51A0A0C4DH38 117 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 PRPSAP2O60256 369 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 SCRG1O75711 98 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 CLCNKAP51800 687 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 RRADP55042 308 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 PPP1CAP62136 330 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 DPYSQ14117 519 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 ZNF648Q5T619 568 aaPredicted RBP18.08■□□□□ 0.48
KATNB1-202ENST00000562542 SLC41A2Q96JW4 573 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 ZNF514Q96K75 400 aaPredicted RBP18.08■□□□□ 0.48
KATNB1-202ENST00000562542 CHST8Q9H2A9 424 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 FAM83DQ9H4H8 585 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 RUBCNLQ9H714 662 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 ZWILCHQ9H900 591 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 B3GNT3Q9Y2A9 372 aa18.08■□□□□ 0.48
KATNB1-202ENST00000562542 COPG1Q9Y678 874 aaKnown RBP18.08■□□□□ 0.48
KATNB1-202ENST00000562542 C1orf232A0A0U1RR37 186 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 OR52A4PA6NMU1 304 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 FZD6O60353 706 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 MAFKO60675 156 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 KLK3P07288 261 aaPredicted RBP18.07■□□□□ 0.48
KATNB1-202ENST00000562542 RPL10P27635 214 aaKnown RBP18.07■□□□□ 0.48
KATNB1-202ENST00000562542 KLK7P49862 253 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 VAV2P52735 878 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 PER3P56645 1201 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 JAM2P57087 298 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 HENMT1Q5T8I9 393 aaKnown RBP18.07■□□□□ 0.48
KATNB1-202ENST00000562542 IZUMO3Q5VZ72 239 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 MED25Q71SY5 747 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 MCEMP1Q8IX19 187 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 ENDOVQ8N8Q3 282 aaKnown RBP18.07■□□□□ 0.48
KATNB1-202ENST00000562542 TMEM102Q8N9M5 508 aaPredicted RBP18.07■□□□□ 0.48
KATNB1-202ENST00000562542 ADAMTS17Q8TE56 1095 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 SMAD5Q99717 465 aaKnown RBP18.07■□□□□ 0.48
KATNB1-202ENST00000562542 SLC40A1Q9NP59 571 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 PKD2L2Q9NZM6 624 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 EPHA6Q9UF33 1036 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 CHKBQ9Y259 395 aa18.07■□□□□ 0.48
KATNB1-202ENST00000562542 F8P00451 2351 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 H3BRJ5 948 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 RNF8O76064 485 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 HCAR3P49019 387 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 SPINT3P49223 89 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 ZNF135P52742 658 aaPredicted RBP18.06■□□□□ 0.48
KATNB1-202ENST00000562542 CDH6P55285 790 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 GPS2Q13227 327 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 VWA5B1Q5TIE3 1220 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 FAM69BQ5VUD6 431 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 LYPLAL1Q5VWZ2 237 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 SP5Q6BEB4 398 aaPredicted RBP18.06■□□□□ 0.48
KATNB1-202ENST00000562542 RBM12BQ8IXT5 1001 aaKnown RBP18.06■□□□□ 0.48
KATNB1-202ENST00000562542 GLIS1Q8NBF1 620 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 SGSM3Q96HU1 749 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 WDR24Q96S15 920 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 TAB2Q9NYJ8 693 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 TRIM10Q9UDY6 481 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 SLC23A2Q9UGH3 650 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 TTLL3Q9Y4R7 772 aa18.06■□□□□ 0.48
KATNB1-202ENST00000562542 LRRTM2O43300 516 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 GADD45BO75293 160 aaPredicted RBP18.05■□□□□ 0.48
KATNB1-202ENST00000562542 SLC25A14O95258 325 aaPredicted RBP18.05■□□□□ 0.48
KATNB1-202ENST00000562542 AMPD1P23109 780 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 MIPP30301 263 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 HNRNPH3P31942 346 aaKnown RBP18.05■□□□□ 0.48
KATNB1-202ENST00000562542 ARL4AP40617 200 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 DRG2P55039 364 aaKnown RBP18.05■□□□□ 0.48
KATNB1-202ENST00000562542 ZNF569Q5MCW4 686 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 CERS6Q6ZMG9 384 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 RAVER1Q8IY67 606 aaKnown RBP18.05■□□□□ 0.48
KATNB1-202ENST00000562542 LPCAT1Q8NF37 534 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 CCHCR1Q8TD31 782 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 POLR1EQ9GZS1 481 aaKnown RBP18.05■□□□□ 0.48
KATNB1-202ENST00000562542 RAB33BQ9H082 229 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 C5AR2Q9P296 337 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 TCFL5Q9UL49 500 aa18.05■□□□□ 0.48
KATNB1-202ENST00000562542 ADGRG4Q8IZF6 3080 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 UBA6A0AVT1 1052 aaPredicted RBP18.04■□□□□ 0.48
KATNB1-202ENST00000562542 PRSS44E7EML9 344 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 KMOO15229 486 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 JCHAINP01591 159 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 ALPPP05187 535 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 ZNF7P17097 686 aaPredicted RBP18.04■□□□□ 0.48
KATNB1-202ENST00000562542 CA4P22748 312 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 GLRBP48167 497 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 GSDMDP57764 484 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 TUBB4BP68371 445 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 ATP1A4Q13733 1029 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 TUBB2AQ13885 445 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 ZXDCQ2QGD7 858 aaPredicted RBP18.04■□□□□ 0.48
KATNB1-202ENST00000562542 ANKRD20A8PQ5CZ79 823 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 ALS2CLQ60I27 953 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 HGSNATQ68CP4 663 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 KLHL35Q6PF15 583 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 LRRTM4Q86VH4 590 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 PSTKQ8IV42 348 aaKnown RBP18.04■□□□□ 0.48
KATNB1-202ENST00000562542 MCOLN2Q8IZK6 566 aa18.04■□□□□ 0.48
KATNB1-202ENST00000562542 UBE2Q2Q8WVN8 375 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms