RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 CRTC1Q6UUV9 634 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 RBM44Q6ZP01 1051 aaKnown RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 POLNQ7Z5Q5 900 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 LUZP1Q86V48 1076 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 SDR16C5Q8N3Y7 309 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 NPWQ8N729 165 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 ZNF248Q8NDW4 579 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 NUP43Q8NFH3 380 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 WDR48Q8TAF3 677 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 PDCD6IPQ8WUM4 868 aaKnown RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 SYN2Q92777 582 aaPredicted RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 GRAMD1AQ96CP6 724 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 IQCDQ96DY2 449 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 WDR92Q96MX6 357 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 ZNF578Q96N58 590 aaPredicted RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 PSKH2Q96QS6 385 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 PLCD4Q9BRC7 762 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 LRRC61Q9BV99 259 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 NUP85Q9BW27 656 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 BOCQ9BWV1 1114 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 CLPBQ9H078 707 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 SYNDIG1Q9H7V2 258 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 POLR1BQ9H9Y6 1135 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 KLQ9UEF7 1012 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 MOSPD1Q9UJG1 213 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 GPR34Q9UPC5 381 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 LUC7L2Q9Y383 392 aaKnown RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 OR1A2Q9Y585 309 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 U3KQA8 63 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 ADAMTS20P59510 1910 aa7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 URB1O60287 2271 aaKnown RBP7.99□□□□□ -1.13
AC009090.1-201ENST00000562409 KNTC1P50748 2209 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 TDRD6O60522 2096 aaKnown RBP7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 KRT10P13645 584 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 PRKCAP17252 672 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 IL1R2P27930 398 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 SERPINB6P35237 376 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 MMP12P39900 470 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CDH6P55285 790 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 PPP2R2AP63151 447 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 DPYSQ14117 519 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 SPIDRQ14159 915 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 MLANAQ16655 118 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 ALG11Q2TAA5 492 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 SOWAHCQ53LP3 525 aaPredicted RBP7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 MARC1Q5VT66 337 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 BROXQ5VW32 411 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 DENND2CQ68D51 928 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 ALKBH5Q6P6C2 394 aaKnown RBP7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 LIPIQ6XZB0 460 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CYP4V2Q6ZWL3 525 aaPredicted RBP7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 DPPA4Q7L190 304 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 TAF8Q7Z7C8 310 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CPNE8Q86YQ8 564 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 SLC35F3Q8IY50 421 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 NDUFAF2Q8N183 169 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 ATPAF2Q8N5M1 289 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 OR6C4Q8NGE1 309 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 TEKT4Q8WW24 435 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 UBXN4Q92575 508 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 ECHDC3Q96DC8 303 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 NAF1Q96HR8 494 aaKnown RBP7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CSPG4P5Q96PW8 444 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 NUDCD1Q96RS6 583 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 LGMNQ99538 433 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CCDC3Q9BQI4 270 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 FUCA2Q9BTY2 467 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 THAP2Q9H0W7 228 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 PCDH18Q9HCL0 1135 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 KCTD5Q9NXV2 234 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 IMPACTQ9P2X3 320 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 ANAPC7Q9UJX3 599 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 PNMA8BQ9ULN7 279 aaPredicted RBP7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CAPN11Q9UMQ6 739 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 PHTF1Q9UMS5 762 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 CHD6Q8TD26 2715 aa7.98□□□□□ -1.13
AC009090.1-201ENST00000562409 A0A087X0T9 212 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 TMX2-CTNND1H3BSU7 103 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 TRAFD1O14545 582 aaPredicted RBP7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 MAFKO60675 156 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 SOCS5O75159 536 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 TCEA3O75764 348 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 CPP00450 1065 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 CYP1A2P05177 515 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 TPM3P06753 285 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 THBDP07204 575 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 HOXC4P09017 264 aaPredicted RBP7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 FAM228BP0C875 321 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 CYP2A6P11509 494 aaPredicted RBP7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 TCF4P15884 667 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 PTMSP20962 102 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 HOXC12P31275 282 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 MMP13P45452 471 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 ERVPABLB-1P60509 514 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 RALGDSQ12967 914 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 ARHGEF7Q14155 803 aa7.97□□□□□ -1.13
AC009090.1-201ENST00000562409 SF1Q15637 639 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms