RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 GNA12Q03113 381 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 EIF4EBP2Q13542 120 aaPredicted RBP5.24□□□□□ -1.57
HERC1-213ENST00000561359 ATP1A4Q13733 1029 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 MYBPC3Q14896 1274 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 CNGA2Q16280 664 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 UGP2Q16851 508 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 C5orf22Q49AR2 442 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 CFAP58Q5T655 872 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 MEI1Q5TIA1 1274 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 FAM69BQ5VUD6 431 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 KRT39Q6A163 491 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 PWWP2BQ6NUJ5 590 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 PNCKQ6P2M8 343 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 CYB5D1Q6P9G0 228 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 TMEM270Q6UE05 265 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 FAM180AQ6UWF9 173 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 IGFL3Q6UXB1 125 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 ZNF783Q6ZMS7 281 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 LEKR1Q6ZMV7 388 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 MEX3BQ6ZN04 569 aaKnown RBP5.24□□□□□ -1.57
HERC1-213ENST00000561359 UNC13DQ70J99 1090 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 CBLL1Q75N03 491 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 INTS8Q75QN2 995 aaKnown RBP5.24□□□□□ -1.57
HERC1-213ENST00000561359 DRC7Q8IY82 874 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 SFRP1Q8N474 314 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 FBXL13Q8NEE6 735 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 ADAMTS17Q8TE56 1095 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 ARHGEF2Q92974 986 aaKnown RBP5.24□□□□□ -1.57
HERC1-213ENST00000561359 GAL3ST3Q96A11 431 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 SH3KBP1Q96B97 665 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 C9orf72Q96LT7 481 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 GDAP1L1Q96MZ0 367 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 TGM7Q96PF1 710 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 MED15Q96RN5 788 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 MIPEPQ99797 713 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 SMR3AQ99954 134 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 FOXC2Q99958 501 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 NCAPGQ9BPX3 1015 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 WNT10AQ9GZT5 417 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 CXXC4Q9H2H0 198 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 PDE7BQ9NP56 450 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 DLL4Q9NR61 685 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 PHPT1Q9NRX4 125 aaPredicted RBP5.24□□□□□ -1.57
HERC1-213ENST00000561359 CCM2LQ9NUG4 571 aaPredicted RBP5.24□□□□□ -1.57
HERC1-213ENST00000561359 OLAHQ9NV23 265 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 KBTBD4Q9NVX7 518 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 RAB20Q9NX57 234 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 ZNHIT2Q9UHR6 403 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 SH3BGRL2Q9UJC5 107 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 RARRES3Q9UL19 164 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 HPCAL4Q9UM19 191 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 SNX10Q9Y5X0 201 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 ST14Q9Y5Y6 855 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 CLIC4Q9Y696 253 aa5.24□□□□□ -1.57
HERC1-213ENST00000561359 LRP4O75096 1905 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 GOLGA6BA6NDN3 693 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 SRGAP2O75044 1071 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 PIGNO95427 931 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 IGSF6O95976 241 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CALCAP01258 141 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 PAEPP09466 180 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 ELFN1P0C7U0 828 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 JUNBP17275 347 aaPredicted RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 AMD1P17707 334 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CASP1P29466 404 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 ADSLP30566 484 aaPredicted RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 ACVRL1P37023 503 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 MMP12P39900 470 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 POLD2P49005 469 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 MXI1P50539 228 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 SMSP52788 366 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CSNK1G2P78368 415 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 OTUD4Q01804 1114 aaKnown RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 TUBB3Q13509 450 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CUL2Q13617 745 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 LAMB3Q13751 1172 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 STILQ15468 1287 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 TAF5Q15542 800 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CEBPEQ15744 281 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 TMCO4Q5TGY1 634 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 FAAH2Q6GMR7 532 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 DOK6Q6PKX4 331 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 TMEM207Q6UWW9 146 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 GFRALQ6UXV0 394 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 BRAPQ7Z569 592 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 TMEM200AQ86VY9 491 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 DEFB106AQ8N104 65 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 PELI3Q8N2H9 469 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 CBARPQ8N350 705 aaPredicted RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 GALNT16Q8N428 558 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 ZBTB2Q8N680 514 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 PAF1Q8N7H5 531 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 BCORP1Q8N888 145 aa5.23□□□□□ -1.57
HERC1-213ENST00000561359 ENDOVQ8N8Q3 282 aaKnown RBP5.23□□□□□ -1.57
HERC1-213ENST00000561359 CLEC1AQ8NC01 280 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms