RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZDHHC24Q6UX98 284 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 ZNF534Q76KX8 674 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 LRRTM4Q86VH4 590 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 MPP5Q8N3R9 675 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 ARL10Q8N8L6 244 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 NAT6Q93015 286 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 DNAJC1Q96KC8 554 aaKnown RBP13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 TIMM29Q9BSF4 260 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 NAT9Q9BTE0 207 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 CLPBQ9H078 707 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 DPH5Q9H2P9 285 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 MRPL40Q9NQ50 206 aaKnown RBP13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 ZDHHC18Q9NUE0 388 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 UCKL1Q9NWZ5 548 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 GRHL1Q9NZI5 618 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 SAMD15Q9P1V8 674 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 ATXN10Q9UBB4 475 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 BTBD3Q9Y2F9 522 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 WDR87Q6ZQQ6 2873 aa13.82□□□□□ -0.2
PKNOX1-209ENST00000560448 DCDC2BA2VCK2 349 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 H3BQF6 201 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 AGPSO00116 658 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 YY2O15391 372 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 FFAR2O15552 330 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 BUD23O43709 281 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 MSH3P20585 1137 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 MC4RP32245 332 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 MAGEA3P43357 314 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 CBX1P83916 185 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 HLTFQ14527 1009 aaKnown RBP eCLIP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 ITIH4Q14624 930 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 GPRC6AQ5T6X5 926 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TAF8Q7Z7C8 310 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 CCNJLQ8IV13 435 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 NXPE1Q8N323 547 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 OR13J1Q8NGT2 312 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SNF8Q96H20 258 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SERPINB12Q96P63 405 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 COPS8Q99627 209 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TMEM168Q9H0V1 697 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 OR2AG1Q9H205 316 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TCEAL2Q9H3H9 227 aaPredicted RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 ACBD3Q9H3P7 528 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 VPS37BQ9H9H4 285 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TREX1Q9NSU2 369 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SOX13Q9UN79 622 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 GPSM3Q9Y4H4 160 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 OAS3Q9Y6K5 1087 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TDRD6O60522 2096 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 IGLV3-16A0A075B6K0 115 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 OR5K4A6NMS3 321 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TRIM38O00635 465 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 PFDN6O15212 129 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 ZW10O43264 779 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TMEM63AO94886 807 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 DKK1O94907 266 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 PNLIPP16233 465 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 AKT1P31749 480 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 RPL21P46778 160 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SESN2P58004 480 aaPredicted RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SIM1P81133 766 aaPredicted RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 DAB2P98082 770 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 FOXK2Q01167 660 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 DNAJC21Q5F1R6 531 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 OGFOD3Q6PK18 319 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TRIM74Q86UV6 250 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 IQCKQ8N0W5 287 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 WDR48Q8TAF3 677 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 LRRC39Q96DD0 335 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 DCUN1D1Q96GG9 259 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 APOLD1Q96LR9 279 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TXLNGYQ9BZA5 131 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 TRIM31Q9BZY9 425 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 PIH1D1Q9NWS0 290 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 ZNHIT2Q9UHR6 403 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 ANAPC5Q9UJX4 755 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 KCTD3Q9Y597 815 aa13.81□□□□□ -0.2
PKNOX1-209ENST00000560448 DNAH14Q0VDD8 3507 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 ARID1BQ8NFD5 2236 aaPredicted RBP13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 FAM237BA0A1B0GVD1 139 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 TCRBV7S3A2A0A539 114 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 EME2A4GXA9 379 aaPredicted RBP13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 AP2A2O94973 939 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 TTC4O95801 387 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 FUCA1P04066 466 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 ACRV1P26436 265 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 IVDP26440 423 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 NSG1P42857 185 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 POLD2P49005 469 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
PKNOX1-209ENST00000560448 E2F1Q01094 437 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms