RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MOGQ16653 247 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ZCCHC8Q6NZY4 707 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 SLC22A16Q86VW1 577 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CEP97Q8IW35 865 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 TEKT5Q96M29 485 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 YME1L1Q96TA2 773 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 KATNAL1Q9BW62 490 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CUEDC1Q9NWM3 386 aaPredicted RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 PDP1Q9P0J1 537 aaPredicted RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 MTRRQ9UBK8 725 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ARL5AQ9Y689 179 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 COL22A1Q8NFW1 1626 aaPredicted RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 TOGARAM1Q9Y4F4 1720 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SMIM28A0A1B0GU29 152 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SH3PXD2BA1X283 911 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SDHDO14521 159 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CYP7B1O75881 506 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 OR4F21O95013 312 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 BMP10O95393 424 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ICAM3P32942 547 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 EIF2S3P41091 472 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 MFSD10Q14728 455 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CRY1Q16526 586 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SMU1Q2TAY7 513 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 AP5B1Q2VPB7 878 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 COLEC12Q5KU26 742 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 FAM91A1Q658Y4 838 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SLC2A7Q6PXP3 512 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 TAC4Q86UU9 113 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ASB12Q8WXK4 309 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 TOP1MTQ969P6 601 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 MED8Q96G25 268 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ZC3H10Q96K80 434 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 SNX27Q96L92 541 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 BIRC8Q96P09 236 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 FAM129BQ96TA1 746 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ADGRE3Q9BY15 652 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SH3BP4Q9P0V3 963 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CNTNAP1P78357 1384 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 hCG_2039718K7EN88 272 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 TBX1O43435 398 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 NTRK1P04629 796 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SMIM10L2AP0DMW4 78 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SMIM10L2BP0DMW5 78 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 UMPSP11172 480 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 COX7A2P14406 83 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 PSMA3P25788 255 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 PBLDP30039 288 aaPredicted RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 FEN1P39748 380 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 ATP6V0D1P61421 351 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CSNK2BP67870 215 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 TYSND1Q2T9J0 566 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 HMBOX1Q6NT76 420 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 KLHL24Q6TFL4 600 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 DET1Q7L5Y6 550 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 MAVSQ7Z434 540 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SYT12Q8IV01 421 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 CLIP4Q8N3C7 705 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 NKAPQ8N5F7 415 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 SIDT2Q8NBJ9 832 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 GRPEL2Q8TAA5 225 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SLC35F5Q8WV83 523 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SLC29A1Q99808 456 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 KCNS3Q9BQ31 491 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 EIF2B4Q9UI10 523 aaKnown RBP7.06□□□□□ -1.28
USP3-210ENST00000559192 ATPIF1Q9UII2 106 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 FBXW11Q9UKB1 542 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 SH3BP1Q9Y3L3 701 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 ITGB4P16144 1822 aa7.06□□□□□ -1.28
USP3-210ENST00000559192 AQP12BA6NM10 295 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 FAM72CH0Y354 149 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 SCAMP3O14828 347 aaKnown RBP7.05□□□□□ -1.28
USP3-210ENST00000559192 RGS10O43665 173 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 CLPXO76031 633 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 CYBBP04839 570 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 IMPDH1P20839 514 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 RRM2P31350 389 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 CPT1AP50416 773 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 RHOAP61586 193 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 HERVK_113P63132 956 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 MED22Q15528 200 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 INO80DQ53TQ3 878 aaPredicted RBP7.05□□□□□ -1.28
USP3-210ENST00000559192 TSTD2Q5T7W7 516 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 FAM72AQ5TYM5 149 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 FAM72DQ6L9T8 149 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 DCLRE1AQ6PJP8 1040 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 AFTPHQ6ULP2 937 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 FAM72BQ86X60 149 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 CIR1Q86X95 450 aaPredicted RBP7.05□□□□□ -1.28
USP3-210ENST00000559192 AQP12AQ8IXF9 295 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 IZUMO1Q8IYV9 350 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 FAM9CQ8IZT9 166 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 CACTIN-AS1Q8N1I8 211 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 AMER2Q8N7J2 671 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 PIK3C3Q8NEB9 887 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 OR8H1Q8NGG4 311 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 OR10Q1Q8NGQ4 319 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 ZNF778Q96MU6 729 aa7.05□□□□□ -1.28
USP3-210ENST00000559192 GPR21Q99679 349 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms