RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 A0A088AWK7 358 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 A8MUA0 341 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ZNF10P21506 573 aaPredicted RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 TXNL4AP83876 142 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 APOBEC3HQ6NTF7 200 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 ZNF730Q6ZMV8 503 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 UBE2R2Q712K3 238 aaPredicted RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 ZDHHC17Q8IUH5 632 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 MREGQ8N565 214 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 OR2L3Q8NG85 312 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DHRS1Q96LJ7 313 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CLCC1Q96S66 551 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 RNF38Q9H0F5 515 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 PNPLA6Q8IY17 1366 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 NARSO43776 548 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 CLPXO76031 633 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 EPHX1P07099 455 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 PTNP21246 168 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 RPL9P32969 192 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 CLCN5P51795 746 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CBX2Q14781 532 aaPredicted RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 CUZD1Q86UP6 607 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 GTPBP3Q969Y2 492 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 DNAJA3Q96EY1 480 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 RBM4BQ9BQ04 359 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 C2orf49Q9BVC5 232 aaPredicted RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 RBM4Q9BWF3 364 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 TTLL2Q9BWV7 592 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 SNTG1Q9NSN8 517 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 GMIPQ9P107 970 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 MAGEL2Q9UJ55 1249 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 TRAF6Q9Y4K3 522 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 WASF2Q9Y6W5 498 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 FABP12A6NFH5 140 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 TM7SF2O76062 418 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DLG1Q12959 904 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CYP27C1Q4G0S4 372 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 RALGPS1Q5JS13 557 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 COLEC12Q5KU26 742 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 OGFRL1Q5TC84 451 aaPredicted RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 FRRS1Q6ZNA5 592 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 PRR23BQ6ZRT6 265 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 TTC29Q8NA56 475 aaPredicted RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 EXOSC8Q96B26 276 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 KAZALD1Q96I82 304 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DNAJC11Q9NVH1 559 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 AGO1Q9UL18 857 aaKnown RBP13.86□□□□□ -0.19
SPG11-210ENST00000558319 TIMM22Q9Y584 194 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 NCOA3Q9Y6Q9 1424 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 A0A0G2JN53 185 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 A8MU76 341 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DNM1LO00429 736 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ERBB2P04626 1255 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ITIH1P19827 911 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 NOS2P35228 1153 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 PBX3P40426 434 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 STK40Q8N2I9 435 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 HM13Q8TCT9 377 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 C5orf34Q96MH7 638 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ZFP3Q96NJ6 502 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 QRFPRQ96P65 431 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 TUBGCP5Q96RT8 1024 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 FAM198AQ9UFP1 575 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CSN2P05814 226 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DCDC1P59894 354 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 PITRM1Q5JRX3 1037 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 CD101Q93033 1021 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ZNF285Q96NJ3 590 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 ZNF607Q96SK3 696 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 DPEP2Q9H4A9 486 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 COMMD3Q9UBI1 195 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 PHF24Q9UPV7 400 aa13.86□□□□□ -0.19
SPG11-210ENST00000558319 TLR5O60602 858 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ABHD2P08910 425 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 TRABD2AQ86V40 505 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 GPC2Q8N158 579 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CEP170BQ9Y4F5 1589 aaPredicted RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 SLC31A1O15431 190 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CYP1A2P05177 515 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ITGAVP06756 1048 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 BPGMP07738 259 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 NUDT17P0C025 328 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 FMO3P31513 532 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 GNA12Q03113 381 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ACAP2Q15057 778 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CCNYL2Q5T2Q4 361 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 CLEC6AQ6EIG7 209 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 SYCE2Q6PIF2 218 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ATAD1Q8NBU5 361 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 ZNF350Q9GZX5 532 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 hCG_2039718K7EN88 272 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 PLOD2O00469 737 aa13.85□□□□□ -0.19
SPG11-210ENST00000558319 RSL1D1O76021 490 aaKnown RBP13.85□□□□□ -0.19
SPG11-210ENST00000558319 OTCP00480 354 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms