RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 RHOXF2Q9BQY4 288 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 SLC13A1Q9BZW2 595 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 OR2AG1Q9H205 316 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 CARS2Q9HA77 564 aaKnown RBP12.11□□□□□ -0.47
RCCD1-209ENST00000557750 CYP4F12Q9HCS2 524 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 TM7SF3Q9NS93 570 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 TREX1Q9NSU2 369 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 SMOXQ9NWM0 555 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 APOBEC3BQ9UH17 382 aaKnown RBP12.11□□□□□ -0.47
RCCD1-209ENST00000557750 KLF15Q9UIH9 416 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 TMPRSS11EQ9UL52 423 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 PNMA8BQ9ULN7 279 aaPredicted RBP12.11□□□□□ -0.47
RCCD1-209ENST00000557750 SLC17A4Q9Y2C5 497 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 OAS3Q9Y6K5 1087 aaKnown RBP12.11□□□□□ -0.47
RCCD1-209ENST00000557750 RPS6KL1Q9Y6S9 549 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 BPTFQ12830 3046 aa12.11□□□□□ -0.47
RCCD1-209ENST00000557750 FAM237BA0A1B0GVD1 139 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TNFP01375 233 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 POLBP06746 335 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 AKT1P31749 480 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CA5AP35218 305 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 RXRGP48443 463 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 HK3P52790 923 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.472e-11■■■■■ 28.3
RCCD1-209ENST00000557750 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TCEA2Q15560 299 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 GPR33Q49SQ1 333 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ANKRD20A4Q4UJ75 823 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 LDLRAP1Q5SW96 308 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 KCTD16Q68DU8 428 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 FBXO38Q6PIJ6 1188 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CENPUQ71F23 418 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 NAXDQ8IW45 347 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 OTUD6BQ8N6M0 293 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 OR4L1Q8NH43 312 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ADAMTS14Q8WXS8 1223 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SEC14L1Q92503 715 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TCEAL2Q9H3H9 227 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TRIM39Q9HCM9 518 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 FAM114A2Q9NRY5 505 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 VPS18Q9P253 973 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ATXN10Q9UBB4 475 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SUFUQ9UMX1 484 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CELSR3Q9NYQ7 3312 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ADAMTS20P59510 1910 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 DOCK9Q9BZ29 2069 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 APC2O95996 2303 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 LRRK1Q38SD2 2015 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 YKT6O15498 198 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 USP1O94782 785 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CDK14O94921 469 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 VAPBO95292 243 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CTSEP14091 401 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 PGAM1P18669 254 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 MSH3P20585 1137 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 EPHA8P29322 1005 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ELK3P41970 407 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 GNPDA1P46926 289 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CDKN1CP49918 316 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TMEM115Q12893 351 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 BNIP3Q12983 259 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 GTF2H3Q13889 308 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 HLTFQ14527 1009 aaKnown RBP eCLIP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SHBQ15464 509 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 KHDC1Q4VXA5 237 aaKnown RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SOWAHCQ53LP3 525 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 FASTKD1Q53R41 847 aaKnown RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 PRRT3Q5FWE3 981 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ZDHHC24Q6UX98 284 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ADGRG6Q86SQ4 1221 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 TMEM135Q86UB9 458 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 PDZD3Q86UT5 571 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SERPINA9Q86WD7 417 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 GALNT13Q8IUC8 556 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 PIANPQ8IYJ0 282 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ZBED8Q8IZ13 594 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 NXPE1Q8N323 547 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 DDHD1Q8NEL9 900 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 IFT81Q8WYA0 676 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 LRRC39Q96DD0 335 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 DCUN1D1Q96GG9 259 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 COPS8Q99627 209 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 EBNA1BP2Q99848 306 aaKnown RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 NAT9Q9BTE0 207 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ZCCHC2Q9C0B9 1178 aaKnown RBP12.1□□□□□ -0.47
RCCD1-209ENST00000557750 ZNHIT2Q9UHR6 403 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 DGKBQ9Y6T7 804 aa12.1□□□□□ -0.47
RCCD1-209ENST00000557750 SETXQ7Z333 2677 aaKnown RBP12.09□□□□□ -0.47
RCCD1-209ENST00000557750 ACACAQ13085 2346 aa12.09□□□□□ -0.47
RCCD1-209ENST00000557750 AGAP14A8MT82 685 aa12.09□□□□□ -0.47
RCCD1-209ENST00000557750 GOLGA8KD6RF30 607 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms