RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 B4GALNT1Q00973 533 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 NRG1Q02297 640 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 HLTFQ14527 1009 aaKnown RBP eCLIP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 LRRC14Q15048 493 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 C14orf28Q4W4Y0 310 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 CCDC38Q502W7 563 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 ZCWPW2Q504Y3 356 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 PRR30Q53SZ7 412 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 RABGAP1LQ5R372 815 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 ANKS6Q68DC2 871 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TTC19Q6DKK2 380 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 EPM2AIP1Q7L775 607 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 RD3Q7Z3Z2 195 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TMC3Q7Z5M5 1100 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 CPLX4Q7Z7G2 160 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 VPS36Q86VN1 386 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 FAM129CQ86XR2 697 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 SULF2Q8IWU5 870 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TRIM42Q8IWZ5 723 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 C12orf56Q8IXR9 622 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 SCML4Q8N228 414 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TTC39CQ8N584 583 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 ATP11CQ8NB49 1132 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 KIAA0895Q8NCT3 520 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 FAM46DQ8NEK8 389 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TSACCQ96A04 125 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 ZNF317Q96PQ6 595 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 NAP1L3Q99457 506 aaPredicted RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 NUDT22Q9BRQ3 303 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 ZPBPQ9BS86 351 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 FEM1AQ9BSK4 669 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 C1QTNF7Q9BXJ2 289 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TXLNGYQ9BZA5 131 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 RAB17Q9H0T7 212 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 MMRN2Q9H8L6 949 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 SLAMF7Q9NQ25 335 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 RRN3Q9NYV6 651 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 CTNNAL1Q9UBT7 734 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 HESX1Q9UBX0 185 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 VPS28Q9UK41 221 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 NENFQ9UMX5 172 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 HS3ST2Q9Y278 367 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 MRPS18BQ9Y676 258 aaKnown RBP6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 POLEQ07864 2286 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 PKDREJQ9NTG1 2253 aa6.81□□□□□ -1.32
SPTLC2-206ENST00000557566 TMEM110-MUSTN1A8MSY1 372 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 B4DGG1 531 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 F8VZ95 297 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 RNF103O00237 685 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 B4GAT1O43505 415 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 AGTP01019 485 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 LTFP02788 710 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 LCP1P13796 627 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 HTR1BP28222 390 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ALDH4A1P30038 563 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 L1CAMP32004 1257 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 STAT5AP42229 794 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 SKIV2L2P42285 1042 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 GATA4P43694 442 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 PEX5P50542 639 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 LIMK2P53671 638 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 PER3P56645 1201 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 OR1D5P58170 312 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 BST2Q10589 180 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 DHX34Q14147 1143 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ERV3-1Q14264 604 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 TESK1Q15569 626 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ASIC2Q16515 512 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ALG11Q2TAA5 492 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 GOLGA7BQ2TAP0 167 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 TDRD12Q587J7 1177 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 CXorf57Q6NSI4 855 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 OGFOD3Q6PK18 319 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 CEACAM20Q6UY09 585 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ACAD11Q709F0 780 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 CIR1Q86X95 450 aaPredicted RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 NELFCDQ8IXH7 590 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ESX1Q8N693 406 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 LRRC57Q8N9N7 239 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 CCDC63Q8NA47 563 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 SLC4A11Q8NBS3 891 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 CHST14Q8NCH0 376 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 OR4D9Q8NGE8 314 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ATL2Q8NHH9 583 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 STK35Q8TDR2 534 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 IRGQQ8WZA9 623 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 RAB7BQ96AH8 199 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ARHGEF26Q96DR7 871 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 RTP4Q96DX8 246 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 ALG14Q96F25 216 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 SLC39A13Q96H72 371 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 RUNDC3BQ96NL0 473 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 RBM15Q96T37 977 aaKnown RBP eCLIP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 SPRY4Q9C004 299 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 APOBEC3GQ9HC16 384 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 NOD2Q9HC29 1040 aa6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 MRPL40Q9NQ50 206 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 PPANQ9NQ55 473 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 FAM207AQ9NSI2 230 aaPredicted RBP6.8□□□□□ -1.32
SPTLC2-206ENST00000557566 HAUS2Q9NVX0 235 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms