RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CLDN1O95832 211 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 AGTP01019 485 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ABHD2P08910 425 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ZSCAN5DPP0CG00 497 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 RBP3P10745 1247 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ETS1P14921 441 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ZFXP17010 805 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-230ENST00000557427 IL4RP24394 825 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ABL2P42684 1182 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 KLRB1Q12918 225 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 DPYSQ14117 519 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 TCEA2Q15560 299 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ANKRD20A8PQ5CZ79 823 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 TNFAIP8L3Q5GJ75 292 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 AFMIDQ63HM1 303 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 ARHGAP12Q8IWW6 846 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 NPWQ8N729 165 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 Q8N9G6 341 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-230ENST00000557427 PCDH19Q8TAB3 1148 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 P3H4Q92791 437 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 VOPP1Q96AW1 172 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 C1QTNF2Q9BXJ5 285 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 OSBPL1AQ9BXW6 950 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 B3GNT4Q9C0J1 378 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 SP110Q9HB58 689 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 RCOR3Q9P2K3 495 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-230ENST00000557427 NOVA2Q9UNW9 492 aaKnown RBP12.45□□□□□ -0.42
SHMT2-230ENST00000557427 TP53TG5Q9Y2B4 290 aa12.45□□□□□ -0.42
SHMT2-230ENST00000557427 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 TSPAN6O43657 245 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 MMP20O60882 483 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 XPAP23025 273 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 MAGEA4P43358 317 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 GNGT1P63211 74 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 LACTB2Q53H82 288 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 KIAA1161Q6NSJ0 714 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 SRLQ86TD4 932 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 PRUNE1Q86TP1 453 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 CAMK1DQ8IU85 385 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 CCNJLQ8IV13 435 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 SFTPA2Q8IWL1 248 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 PPIL6Q8IXY8 311 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 LZTR1Q8N653 840 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 PQLC3Q8N755 202 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 PLD5Q8N7P1 536 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 RAB7BQ96AH8 199 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 RTP4Q96DX8 246 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 CATSPER2Q96P56 530 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 CSPG4P5Q96PW8 444 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 CINPQ9BW66 212 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 SUV39H2Q9H5I1 410 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 PDFQ9HBH1 243 aa12.44□□□□□ -0.42
SHMT2-230ENST00000557427 SAE1Q9UBE0 346 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 SETD2Q9BYW2 2564 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-230ENST00000557427 RGS16O15492 202 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 AP1G1O43747 822 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 IVLP07476 585 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 RPL22P35268 128 aaKnown RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 UGT1A3P35503 534 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 RGRP47804 291 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 SCNN1BP51168 640 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 GDF10P55107 478 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 IL10RBQ08334 325 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 CBLBQ13191 982 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 XRCC4Q13426 336 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 DNAJC21Q5F1R6 531 aaKnown RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 UBAP2Q5T6F2 1119 aaKnown RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 FAXCQ5TGI0 409 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 C1QL3Q5VWW1 255 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 DARS2Q6PI48 645 aaKnown RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 C4orf22Q6V702 233 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 CENPUQ71F23 418 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 IL22RA1Q8N6P7 574 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 PAF1Q8N7H5 531 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 CENPTQ96BT3 561 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 SLC13A1Q9BZW2 595 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 CDH19Q9H159 772 aa12.43□□□□□ -0.42
SHMT2-230ENST00000557427 RP1L1Q8IWN7 2480 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-230ENST00000557427 WIPF3A6NGB9 483 aa12.42□□□□□ -0.42
SHMT2-230ENST00000557427 ZNF891A8MT65 544 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-230ENST00000557427 AREL1O15033 823 aa12.42□□□□□ -0.42
SHMT2-230ENST00000557427 VPS4BO75351 444 aa12.42□□□□□ -0.42
SHMT2-230ENST00000557427 ACSL3O95573 720 aa12.42□□□□□ -0.42
SHMT2-230ENST00000557427 IFNB1P01574 187 aa12.42□□□□□ -0.42
SHMT2-230ENST00000557427 PRKAR1AP10644 381 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms