RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZNF689Q96CS4 500 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 CFAP36Q96G28 342 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ZNF333Q96JL9 665 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 B3GALT6Q96L58 329 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MAGEB18Q96M61 343 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 AGAP3Q96P47 875 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ZNF317Q96PQ6 595 aaPredicted RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 FCRL5Q96RD9 977 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 TUBGCP5Q96RT8 1024 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PAFAH2Q99487 392 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 PRMT1Q99873 361 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 DDX50Q9BQ39 737 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 CLSTN3Q9BQT9 956 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CPEB1Q9BZB8 566 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 SLC39A8Q9C0K1 460 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 IL22Q9GZX6 179 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 NACA2Q9H009 215 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 NSRP1Q9H0G5 558 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 GBA3Q9H227 469 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 CWH43Q9H720 699 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.5□□□□□ -1.69
SRP54-212ENST00000556992 MRPL17Q9NRX2 175 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 RBM22Q9NW64 420 aaKnown RBP eCLIP4.5□□□□□ -1.69
SRP54-212ENST00000556992 OSER1Q9NX31 292 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MOCS1Q9NZB8 636 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 TRPM5Q9NZQ8 1165 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 SAMD15Q9P1V8 674 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 IPO11Q9UI26 975 aaKnown RBP4.5□□□□□ -1.69
SRP54-212ENST00000556992 CHMP2BQ9UQN3 213 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MFHAS1Q9Y4C4 1052 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 SNX10Q9Y5X0 201 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 FAM169AQ9Y6X4 670 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 COL4A3Q01955 1670 aa4.5□□□□□ -1.69
SRP54-212ENST00000556992 MYH11P35749 1972 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PLXNB2O15031 1838 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 SIP14410 1827 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 FAM237BA0A1B0GVD1 139 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 A0A1W2PPM1 405 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 WDR27A2RRH5 827 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 FAM221BA6H8Z2 402 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 FAM159BA6NKW6 160 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 AHRRA9YTQ3 701 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TCP11X1B4DZS4 312 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PRRG1O14668 218 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MSI1O43347 362 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 B3GALT2O43825 422 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TYROBPO43914 113 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TLR5O60602 858 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 BANF1O75531 89 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 KIAA0754O94854 1291 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TBX18O95935 607 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MOCS2O96007 188 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 IGLV3-27P01718 113 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 FGBP02675 491 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 JUNP05412 331 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 CA4P22748 312 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MGAT1P26572 445 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PSMB4P28070 264 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 RPA3P35244 121 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 PBX3P40426 434 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 HADHAP40939 763 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 GRIA1P42261 906 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 GPR15P49685 360 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 GEMP55040 296 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 SLC18A2Q05940 514 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MGAT5Q09328 741 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CDH17Q12864 832 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ILF2Q12905 390 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 PLD1Q13393 1074 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 LAMB3Q13751 1172 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ITIH4Q14624 930 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 C5orf22Q49AR2 442 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MS4A13Q5J8X5 152 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PCID2Q5JVF3 399 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 COLEC12Q5KU26 742 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 RABGAP1LQ5R372 815 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 SYCP2LQ5T4T6 812 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 STXBP5Q5T5C0 1151 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 GRTP1Q5TC63 336 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 MARC1Q5VT66 337 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 KCTD11Q693B1 232 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 FBXL22Q6P050 247 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 PRSS55Q6UWB4 352 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 Q6YL49 198 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 RGS9BPQ6ZS82 235 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 YTHDF3Q7Z739 585 aaKnown RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 C14orf80Q86SX3 495 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TMEM135Q86UB9 458 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 ITIH5Q86UX2 942 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 HERC6Q8IVU3 1022 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CCDC117Q8IWD4 279 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 KLHDC8BQ8IXV7 354 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 TCEAL8Q8IYN2 117 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 RNF168Q8IYW5 571 aaPredicted RBP4.49□□□□□ -1.69
SRP54-212ENST00000556992 ZNF683Q8IZ20 524 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 CACNA2D3Q8IZS8 1091 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 SLC39A11Q8N1S5 342 aa4.49□□□□□ -1.69
SRP54-212ENST00000556992 OTUD6BQ8N6M0 293 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms