RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 ESR1P03372 595 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 RETP07949 1114 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 SYPP08247 313 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ZNF8P17098 575 aaPredicted RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 GP5P40197 560 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 MSH2P43246 934 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 LEPRP48357 1165 aaKnown RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ARRB1P49407 418 aaPredicted RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ADARP55265 1226 aaKnown RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 NXPH1P58417 271 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 SRP54P61011 504 aaKnown RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 MPP1Q00013 466 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 PPARDQ03181 441 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ZNF648Q5T619 568 aaPredicted RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 IL27RAQ6UWB1 636 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 RD3Q7Z3Z2 195 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ADGRG6Q86SQ4 1221 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 LRRTM4Q86VH4 590 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 HID1Q8IV36 788 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 OXR1Q8N573 874 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 RASGEF1AQ8N9B8 481 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 LPGAT1Q92604 370 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 MRRFQ96E11 262 aaKnown RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 BOCQ9BWV1 1114 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ZDHHC5Q9C0B5 715 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ARRDC1-AS1Q9H2J1 176 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 CARS2Q9HA77 564 aaKnown RBP12.36□□□□□ -0.43
ABCD4-225ENST00000556517 CYP4F12Q9HCS2 524 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 DNAJC28Q9NX36 388 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 SLC17A6Q9P2U8 582 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ATXN10Q9UBB4 475 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 NCDNQ9UBB6 729 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 SLC6A14Q9UN76 642 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 ANKRD6Q9Y2G4 727 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 BPTFQ12830 3046 aa12.36□□□□□ -0.43
ABCD4-225ENST00000556517 TRPM6Q9BX84 2022 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 KLHL33A6NCF5 533 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 POC1B-GALNT4F8VUJ3 575 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 KHNYNO15037 678 aaKnown RBP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 KMOO15229 486 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GRID2O43424 1007 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 NUAK1O60285 661 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 OR1I1O60431 355 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 PIAS1O75925 651 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 S1PR4O95977 384 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 TNFP01375 233 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 WNT1P04628 370 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 CEACAM5P06731 702 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GSTM1P09488 218 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 CTSEP14091 401 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 RPS3P23396 243 aaKnown RBP eCLIP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 FMO4P31512 558 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 SPRP35270 261 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 NBL1P41271 181 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GNPDA1P46926 289 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 POLD2P49005 469 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 ATXN3P54252 364 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 SLC12A2P55011 1212 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 CSE1LP55060 971 aaKnown RBP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GSTM4Q03013 218 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 LRP8Q14114 963 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 FZD2Q14332 565 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 EFTUD2Q15029 972 aaKnown RBP eCLIP12.35□□□□□ -0.433e-8■■■□□ 15.2
ABCD4-225ENST00000556517 INSCQ1MX18 579 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 KHDC1Q4VXA5 237 aaKnown RBP12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GRTP1Q5TC63 336 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 LGSNQ5TDP6 509 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 CRTC3Q6UUV7 619 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 CLDN19Q8N6F1 224 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GPATCH11Q8N954 259 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 SGF29Q96ES7 293 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 PDXPQ96GD0 296 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 ATXN7L3BQ96GX2 97 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 OR2M4Q96R27 311 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 PAFAH2Q99487 392 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 RHOJQ9H4E5 214 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 FGF22Q9HCT0 170 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 FETUBQ9UGM5 382 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 SUFUQ9UMX1 484 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 NUMA1Q14980 2115 aa12.35□□□□□ -0.43
ABCD4-225ENST00000556517 LRRK1Q38SD2 2015 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 CXorf49A8MYA2 514 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-225ENST00000556517 CHUKO15111 745 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 KPNA5O15131 536 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 DFNA5O60443 496 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 VPS26AO75436 327 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 KRT37O76014 449 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 KRT38O76015 456 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 HAUS5O94927 633 aa12.34□□□□□ -0.43
ABCD4-225ENST00000556517 CER1O95813 267 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms