RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 SYT17Q9BSW7 474 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 FUZQ9BT04 418 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 TKTL2Q9H0I9 626 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 PPCSQ9HAB8 311 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 PPP1R14DQ9NXH3 145 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.87□□□□□ -1.63
PRPF39-209ENST00000556353 SCINQ9Y6U3 715 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 EVC2Q86UK5 1308 aa4.87□□□□□ -1.63
PRPF39-209ENST00000556353 EDC4Q6P2E9 1401 aaKnown RBP4.87□□□□□ -1.63
PRPF39-209ENST00000556353 APOHP02749 345 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-209ENST00000556353 FGF5P12034 268 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 GNAQP50148 359 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 TERF1P54274 439 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 KRTAP10-5P60370 271 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 EEF1A1P68104 462 aaKnown RBP4.86□□□□□ -1.63
PRPF39-209ENST00000556353 RPP30P78346 268 aaKnown RBP4.86□□□□□ -1.63
PRPF39-209ENST00000556353 SETQ01105 290 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-209ENST00000556353 EEF1A1P5Q5VTE0 462 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 ZBTB10Q96DT7 871 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 ALG14Q96F25 216 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 SLC41A2Q96JW4 573 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 TESK2Q96S53 571 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 MPHOSPH8Q99549 860 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 MPP6Q9NZW5 540 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 NSD2O96028 1365 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 NOTCH3Q9UM47 2321 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 COL5A3P25940 1745 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-209ENST00000556353 KIAA1551Q9HCM1 1747 aa4.86□□□□□ -1.63
PRPF39-209ENST00000556353 BRCA1P38398 1863 aaKnown RBP4.86□□□□□ -1.63
PRPF39-209ENST00000556353 MYH14Q7Z406 1995 aaKnown RBP4.85□□□□□ -1.63
PRPF39-209ENST00000556353 TTC36A6NLP5 189 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 TSPAN4O14817 238 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 WDR1O75083 606 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 PEX14O75381 377 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 HSD3B1P14060 373 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 GGT5P36269 586 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 VEGFCP49767 419 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 ISL1P61371 349 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 TLE2Q04725 743 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 SREBF2Q12772 1141 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 GTF2H2Q13888 395 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 STXBP5Q5T5C0 1151 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 GTF2H2CQ6P1K8 395 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 DUS1LQ6P1R4 473 aaKnown RBP4.85□□□□□ -1.63
PRPF39-209ENST00000556353 ZNF852Q6ZMS4 543 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 QSOX2Q6ZRP7 698 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 GCC1Q96CN9 775 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 PABPC5Q96DU9 382 aaKnown RBP4.85□□□□□ -1.63
PRPF39-209ENST00000556353 KIF1BPQ96EK5 621 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 MAELQ96JY0 434 aaKnown RBP4.85□□□□□ -1.63
PRPF39-209ENST00000556353 IFIH1Q9BYX4 1025 aaKnown RBP4.85□□□□□ -1.63
PRPF39-209ENST00000556353 ZNF696Q9H7X3 374 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 FAM118AQ9NWS6 357 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 FAF1Q9UNN5 650 aaPredicted RBP4.85□□□□□ -1.63
PRPF39-209ENST00000556353 OR2W1Q9Y3N9 320 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 UTYO14607 1347 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 TTC21AQ8NDW8 1320 aa4.85□□□□□ -1.63
PRPF39-209ENST00000556353 C4AP0C0L4 1744 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 C4BP0C0L5 1744 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 CCDC7Q96M83 1385 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 IFNL4K9M1U5 179 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 FTCDO95954 541 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 HOXB5P09067 269 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 HOXA1P49639 335 aaPredicted RBP4.84□□□□□ -1.63
PRPF39-209ENST00000556353 ERVK11-1P61568 191 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 VAMP2P63027 116 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 CSNK2A1P68400 391 aaPredicted RBP4.84□□□□□ -1.63
PRPF39-209ENST00000556353 FOXM1Q08050 763 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 GPR68Q15743 365 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 CCDC96Q2M329 555 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 SLC9B1Q4ZJI4 515 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 HIST2H2BDQ6DRA6 164 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 TOM1L2Q6ZVM7 507 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 ASB18Q6ZVZ8 466 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 CERS3Q8IU89 383 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 PCDH20Q8N6Y1 951 aaKnown RBP4.84□□□□□ -1.63
PRPF39-209ENST00000556353 CSNK2A3Q8NEV1 391 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 KLHL29Q96CT2 875 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 ZNF501Q96CX3 271 aaPredicted RBP4.84□□□□□ -1.63
PRPF39-209ENST00000556353 APOPT1Q96IL0 206 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 GLIS2Q9BZE0 524 aaPredicted RBP4.84□□□□□ -1.63
PRPF39-209ENST00000556353 TBX20Q9UMR3 447 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 DLGAP4Q9Y2H0 992 aa4.84□□□□□ -1.63
PRPF39-209ENST00000556353 KIF13BQ9NQT8 1826 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 NINLQ9Y2I6 1382 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 USP17L23D6RBM5 183 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 IFRD1O00458 451 aaPredicted RBP4.83□□□□□ -1.64
PRPF39-209ENST00000556353 LDLRP01130 860 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
PRPF39-209ENST00000556353 ZNF234Q14588 700 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 CCNYL2Q5T2Q4 361 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 FRG2Q64ET8 278 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 PQLC2Q6ZP29 291 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 SLC46A3Q7Z3Q1 461 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 HAPLN4Q86UW8 402 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 CNBD1Q8NA66 436 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 PIGTQ969N2 578 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 ORAI1Q96D31 301 aa4.83□□□□□ -1.64
PRPF39-209ENST00000556353 QRFPRQ96P65 431 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms