RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 OR2M4Q96R27 311 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GSDMCQ9BYG8 508 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CLPBQ9H078 707 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 OR2AG1Q9H205 316 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CCDC68Q9H2F9 335 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 FAM96AQ9H5X1 160 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GAREM1Q9H706 876 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 CARS2Q9HA77 564 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 CYP4F12Q9HCS2 524 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 FGF22Q9HCT0 170 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 INTS10Q9NVR2 710 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 TRNAU1APQ9NX07 287 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 TXNDC16Q9P2K2 825 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 ATXN10Q9UBB4 475 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 APOBEC3BQ9UH17 382 aaKnown RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZNHIT2Q9UHR6 403 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 FBXO5Q9UKT4 447 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 GPR34Q9UPC5 381 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 DOLKQ9UPQ8 538 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 TMEM98Q9Y2Y6 226 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 PCDHB1Q9Y5F3 818 aa7.55□□□□□ -1.2
TDP1-214ENST00000556063 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ZFHX2Q9C0A1 2572 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ARHGEF17Q96PE2 2063 aaPredicted RBP7.55□□□□□ -1.2
TDP1-214ENST00000556063 ADAMTS9Q9P2N4 1935 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 IGLV3-16A0A075B6K0 115 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 A0A1B0GTQ1 180 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 LNP1A1A4G5 178 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 H3BMM5 538 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PRMT5O14744 637 aaPredicted RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 CHUKO15111 745 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 KMOO15229 486 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 GFRA3O60609 400 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 FTH1P02794 183 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ANXA6P08133 673 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 OR56A5P0C7T3 313 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ERVK-10P10266 1014 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ALPPL2P10696 532 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ATP1B2P14415 290 aaPredicted RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 ZNF8P17098 575 aaPredicted RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 ARNTP27540 789 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 SSTR1P30872 391 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 GNPDA1P46926 289 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 SLC14A1Q13336 389 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 NAB1Q13506 487 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 FASTKD3Q14CZ7 662 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 SF3A2Q15428 464 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 INSCQ1MX18 579 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ERCC6LQ2NKX8 1250 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 TYSND1Q2T9J0 566 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PYCR3Q53H96 274 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PTRHD1Q6GMV3 140 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 TCEAL6Q6IPX3 200 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 WDR93Q6P2C0 686 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 TMEM220Q6QAJ8 160 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PACS1Q6VY07 963 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 CCNI2Q6ZMN8 369 aaPredicted RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 KDM7AQ6ZMT4 941 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 MARK2Q7KZI7 788 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 TRMT10CQ7L0Y3 403 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 ADGRG6Q86SQ4 1221 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 GKN2Q86XP6 184 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 CILP2Q8IUL8 1156 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PIANPQ8IYJ0 282 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 CNPY4Q8N129 248 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 AGGF1Q8N302 714 aaeCLIP7.54□□□□□ -1.2
TDP1-214ENST00000556063 MINDY1Q8N5J2 469 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 RASGEF1AQ8N9B8 481 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 OR1E3Q8WZA6 343 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 TCEAL3Q969E4 200 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PANX3Q96QZ0 392 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 EDEM2Q9BV94 578 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 SMOC1Q9H4F8 434 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ANKZF1Q9H8Y5 726 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 ARFGAP3Q9NP61 516 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 TMEM9BQ9NQ34 198 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 RRAGDQ9NQL2 400 aaPredicted RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 IARS2Q9NSE4 1012 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 EVA1BQ9NVM1 165 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 MOCS1Q9NZB8 636 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 GNPTGQ9UJJ9 305 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 TMPRSS11EQ9UL52 423 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 SUFUQ9UMX1 484 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 GPSM3Q9Y4H4 160 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PCDHGB2Q9Y5G2 931 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 OAS3Q9Y6K5 1087 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 CSNK1G3Q9Y6M4 447 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 PLXNB3Q9ULL4 1909 aa7.54□□□□□ -1.2
TDP1-214ENST00000556063 CNOT1A5YKK6 2376 aaKnown RBP7.54□□□□□ -1.2
TDP1-214ENST00000556063 MUC3AQ02505 3323 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ZFC3H1O60293 1989 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 UBA6A0AVT1 1052 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 PCNX2A6NKB5 2137 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 GOLGA8KD6RF30 607 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 GOLGA8TH3BQL2 631 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms