RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 DENND2DQ9H6A0 471 aaPredicted RBP5.3□□□□□ -1.56
VRK1-205ENST00000555402 WDR35Q9P2L0 1181 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 TINAGQ9UJW2 476 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 ANAPC2Q9UJX6 822 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 SNX9Q9Y5X1 595 aa5.3□□□□□ -1.56
VRK1-205ENST00000555402 TRBC2A0A5B9 178 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 URADA6NGE7 173 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 SOCS6O14544 535 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 PLPP2O43688 288 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 TBCAO75347 108 aaKnown RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 HOXB2P14652 356 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 PRLRP16471 622 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 AMTP48728 403 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 RAD23AP54725 363 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 HNRNPH2P55795 449 aaKnown RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 ALCAMQ13740 583 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 SNAPC1Q16533 368 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 MEP1AQ16819 746 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 AMZ1Q400G9 498 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 FAM98BQ52LJ0 330 aaKnown RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 RGMBQ6NW40 437 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 INTS8Q75QN2 995 aaKnown RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 ANKRD23Q86SG2 305 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 LDB1Q86U70 411 aaPredicted RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 FOXRED2Q8IWF2 684 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 RASGEF1CQ8N431 466 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 FBXO39Q8N4B4 442 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 EMC1Q8N766 993 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 HMGCLL1Q8TB92 370 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 CMKLR1Q99788 373 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 SF3B5Q9BWJ5 86 aaKnown RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 KCNK15Q9H427 330 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 ERVMER34-1Q9H9K5 563 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 C5AR2Q9P296 337 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 LARSQ9P2J5 1176 aaKnown RBP5.29□□□□□ -1.56
VRK1-205ENST00000555402 LOXL2Q9Y4K0 774 aa5.29□□□□□ -1.56
VRK1-205ENST00000555402 A8MXE2 369 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 MAGEB17A8MXT2 336 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 ZBTB43O43298 467 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 CDC25AP30304 524 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 TAS2R38P59533 333 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 CAMK2DQ13557 499 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 IL11RAQ14626 422 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 ALDH1L2Q3SY69 923 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 PAPPA-AS1Q5QFB9 102 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 C6orf163Q5TEZ5 329 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 ZDHHC20Q5W0Z9 365 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 CHST3Q7LGC8 479 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 CAMKMTQ7Z624 323 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 SLFN11Q7Z7L1 901 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 GPR180Q86V85 440 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 UBE2Q2Q8WVN8 375 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 NR4A3Q92570 626 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 MTBPQ96DY7 904 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 DACH2Q96NX9 599 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 SLC25A33Q9BSK2 321 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 DCLK3Q9C098 648 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 GOLPH3LQ9H4A5 285 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 NOX4Q9NPH5 578 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 MRGBPQ9NV56 204 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 GDE1Q9NZC3 331 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 FBXL2Q9UKC9 423 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 KLHL20Q9Y2M5 609 aa5.28□□□□□ -1.56
VRK1-205ENST00000555402 TCRBV21S2A2A0A5A6 115 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 LINC01553A4QN01 128 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 TMEM8BA6NDV4 472 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 SLC16A5O15375 505 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 TADA2AO75478 443 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 NMBRP28336 390 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CCR3P51677 355 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CLCNKAP51800 687 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CSE1LP55060 971 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 SIRPAP78324 504 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 ABATP80404 500 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 SPOCK1Q08629 439 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 DECR1Q16698 335 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CRY2Q49AN0 593 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 PAPD4Q6PIY7 484 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 TPRG1Q6ZUI0 275 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 FJX1Q86VR8 437 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 TC2NQ8N9U0 490 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 RBM15BQ8NDT2 890 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 TSPAN14Q8NG11 270 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 OR2AK2Q8NG84 335 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 UTP15Q8TED0 518 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 TEKT4Q8WW24 435 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 DNAAF4Q8WXU2 420 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 MRPS27Q92552 414 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 TAAR8Q969N4 342 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 RHBDF1Q96CC6 855 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 MTERF1Q99551 399 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 HGH1Q9BTY7 390 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 ANKRD2Q9GZV1 360 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 HAO2Q9NYQ3 351 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CRNNQ9UBG3 495 aaPredicted RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 TSPYL4Q9UJ04 414 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms