RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 CDKL1Q00532 357 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 CTSL3PQ5NE16 218 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 UGT3A1Q6NUS8 523 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 PAOXQ6QHF9 649 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 Q6ZNX1 250 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 CPNE9Q8IYJ1 553 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 CLDN19Q8N6F1 224 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 GABPB2Q8TAK5 448 aaPredicted RBP14.71□□□□□ -0.05
XRCC3-211ENST00000555055 EEF1AKMT1Q8WVE0 214 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
XRCC3-211ENST00000555055 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.05
XRCC3-211ENST00000555055 DUS3LQ96G46 650 aaKnown RBP14.71□□□□□ -0.05
XRCC3-211ENST00000555055 PKP2Q99959 881 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 TRIM8Q9BZR9 551 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 CCDC68Q9H2F9 335 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 PCDHGB4Q9UN71 923 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 SH3GLB1Q9Y371 365 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 PCDHGB5Q9Y5G0 923 aa14.71□□□□□ -0.05
XRCC3-211ENST00000555055 USP34Q70CQ2 3546 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 TRIM64CA6NLI5 447 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 ACOT8O14734 319 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 CDK14O94921 469 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 H6PDO95479 791 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 IDO1P14902 403 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 LPOP22079 712 aaPredicted RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 EEF1DP29692 281 aaKnown RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 CD70P32970 193 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 CD97P48960 835 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 WDR5P61964 334 aaKnown RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 MS4A2Q01362 244 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 CEACAM7Q14002 265 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 SPIDRQ14159 915 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 ARHGEF6Q15052 776 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 TAF1AQ15573 450 aaPredicted RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 AGKQ53H12 422 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 PITRM1Q5JRX3 1037 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 C6orf52Q5T4I8 152 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 KLHL35Q6PF15 583 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 IYDQ6PHW0 289 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 CARM1Q86X55 608 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 CDK15Q96Q40 435 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 COPS7BQ9H9Q2 264 aaPredicted RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 MRPL17Q9NRX2 175 aaKnown RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 TUBA8Q9NY65 449 aaPredicted RBP14.71□□□□□ -0.06
XRCC3-211ENST00000555055 VTI1BQ9UEU0 232 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 BLOC1S6Q9UL45 172 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 RNF112Q9ULX5 631 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 DNAJC15Q9Y5T4 150 aa14.71□□□□□ -0.06
XRCC3-211ENST00000555055 H3BSA7 217 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 BMP10O95393 424 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 LINC00032P0C843 101 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 GALK1P51570 392 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 RALGDSQ12967 914 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 RAB33AQ14088 237 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 NCEH1Q6PIU2 408 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 DDIASQ8IXT1 998 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 BHLHE22Q8NFJ8 381 aaPredicted RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 CEP70Q8NHQ1 597 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 RIN3Q8TB24 985 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 ATOH8Q96SQ7 321 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 IL1RL2Q9HB29 575 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 SPG21Q9NZD8 308 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 CCL16O15467 120 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 CLASP2O75122 1294 aaKnown RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 ECI2O75521 394 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 ALDOCP09972 364 aaKnown RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 UGT1A6P19224 532 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 UGT1A1P22309 533 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 UGT1A4P22310 534 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 UGT1A3P35503 534 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 UGT1A5P35504 534 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 SOX11P35716 441 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 HERVK_113P63132 956 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 YBX1P67809 324 aaKnown RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 GRB7Q14451 532 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 TYSND1Q2T9J0 566 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 TPGS2Q68CL5 300 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 DUS1LQ6P1R4 473 aaKnown RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 AFTPHQ6ULP2 937 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 CMTM8Q8IZV2 173 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 ZBTB8BQ8NAP8 495 aaPredicted RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 SMYD1Q8NB12 490 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 LRCH3Q96II8 777 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 MAELQ96JY0 434 aaKnown RBP14.7□□□□□ -0.06
XRCC3-211ENST00000555055 CORO1BQ9BR76 489 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 ERVK-6Q9BXR3 956 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 GPR63Q9BZJ6 419 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 WDR41Q9HAD4 459 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 EFCAB1Q9HAE3 211 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 PNPLA3Q9NST1 481 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 EPS15L1Q9UBC2 864 aa14.7□□□□□ -0.06
XRCC3-211ENST00000555055 H3BNH8 94 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 PIP5K1BO14986 540 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 UBDO15205 165 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 GPC4O75487 556 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 CLTBP09497 229 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 ART3Q13508 389 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 PLA2G4EQ3MJ16 856 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 CHST9Q7L1S5 443 aa14.69□□□□□ -0.06
XRCC3-211ENST00000555055 AMIGO2Q86SJ2 522 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms