RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RPH3AQ9Y2J0 694 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 DERAQ9Y315 318 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 PCDHGA2Q9Y5H1 932 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 USH1CQ9Y6N9 552 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 SESN1Q9Y6P5 492 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 COL11A1P12107 1806 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-227ENST00000554491 FAM186AA6NE01 2351 aa4.43□□□□□ -1.7
ATXN3-227ENST00000554491 TRANK1O15050 2925 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TPRP12270 2363 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 C5orf42Q9H799 3197 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 VPS37CA5D8V6 355 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CAPN8A6NHC0 703 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ARGFXA6NJG6 315 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 A8MX80 341 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 H7C0C1 242 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 NDUFS8O00217 210 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PSMD11O00231 422 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 AP3D1O14617 1153 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CAPN9O14815 690 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SCO2O43819 266 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TJP3O95049 919 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 BMP10O95393 424 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 LARGE1O95461 756 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CLPTM1O96005 669 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PCCAP05165 728 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 IL6P05231 212 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GLAP06280 429 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ASNSP08243 561 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TFPTP0C1Z6 253 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 FAM228BP0C875 321 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 MYBL1P10243 752 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ANXA8P13928 327 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GFAPP14136 432 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 IL1R1P14778 569 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 NQO1P15559 274 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 HOXB8P17481 243 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PDCP20941 246 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CCNE1P24864 410 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PSMA5P28066 241 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 IGHMBP2P38935 993 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 MAPK9P45984 424 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ID4P47928 161 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CDK7P50613 346 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 RAP1GDS1P52306 607 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 COPB1P53618 953 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PEX3P56589 373 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PRAMEP78395 509 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 KCNJ10P78508 379 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TFAP4Q01664 338 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GUCY2DQ02846 1103 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 COASYQ13057 564 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PLD1Q13393 1074 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PICALMQ13492 652 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 HNRNPDQ14103 355 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ITIH4Q14624 930 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 KCNAB1Q14722 419 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TGFBIQ15582 683 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 KCNJ8Q15842 424 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 AANATQ16613 207 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 MINDY4Q4G0A6 757 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GLE1Q53GS7 698 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ANXA8L1Q5VT79 327 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SLX4IPQ5VYV7 408 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ERICH5Q6P6B1 374 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 DHRS4L2Q6PKH6 230 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 C15orf52Q6ZUT6 534 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 MIER3Q7Z3K6 550 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CPLX4Q7Z7G2 160 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GLRX5Q86SX6 157 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TBC1D1Q86TI0 1168 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 RHPN2Q8IUC4 686 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TMTC1Q8IUR5 882 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CMIPQ8IY22 773 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SRRM1Q8IYB3 904 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CBARPQ8N350 705 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CCDC33Q8N5R6 958 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 NAXEQ8NCW5 288 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SPPL3Q8TCT6 385 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GIPC3Q8TF64 312 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ASZ1Q8WWH4 475 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SLC22A18Q96BI1 424 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 TUBGCP3Q96CW5 907 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CYFIP2Q96F07 1278 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CHMP6Q96FZ7 201 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 HES6Q96HZ4 224 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 BOD1Q96IK1 185 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PPM1MQ96MI6 270 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 OLFM1Q99784 485 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 BCL7BQ9BQE9 202 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 ANKRD2Q9GZV1 360 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 PAIP1Q9H074 479 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 CLPBQ9H078 707 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
ATXN3-227ENST00000554491 USP44Q9H0E7 712 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 DPH5Q9H2P9 285 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 LDAHQ9H6V9 325 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 GREM2Q9H772 168 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 SH2D4AQ9H788 454 aa4.42□□□□□ -1.7
ATXN3-227ENST00000554491 LIN28AQ9H9Z2 209 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms