RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 ATG14Q6ZNE5 492 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 SRLQ86TD4 932 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 BBS5Q8N3I7 341 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 JPH3Q8WXH2 748 aaPredicted RBP13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 ART4Q93070 314 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 LRRC45Q96CN5 670 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 LGR4Q9BXB1 951 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 RDH14Q9HBH5 336 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 NOD2Q9HC29 1040 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 STARD5Q9NSY2 213 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 ZDHHC18Q9NUE0 388 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 AKAP7Q9P0M2 348 aaPredicted RBP13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 TTLL3Q9Y4R7 772 aa13.92□□□□□ -0.18
SPTLC2-202ENST00000554365 C9orf172C9J069 976 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 NUDT21O43809 227 aaKnown RBP13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 SFTPCP11686 197 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 ITGB6P18564 788 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 WT1P19544 449 aaPredicted RBP13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 TPSB2P20231 275 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 TNFRSF8P28908 595 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 ADRA1AP35348 466 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 CD86P42081 329 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 CARSP49589 748 aaKnown RBP13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 ITGA8P53708 1063 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 MAZP56270 477 aaKnown RBP13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 BASP1P80723 227 aaKnown RBP13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 BCL2L1Q07817 233 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 ITKQ08881 620 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 RALGDSQ12967 914 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 OLIG2Q13516 323 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 C16orf72Q14CZ0 275 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 ACOX1Q15067 660 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 TPSAB1Q15661 275 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 SLC14A2Q15849 920 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 TBR1Q16650 682 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 AMZ1Q400G9 498 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 TMEM164Q5U3C3 297 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 CCDC70Q6NSX1 233 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 LIPIQ6XZB0 460 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 ZNF534Q76KX8 674 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 PIM3Q86V86 326 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 SLITRK4Q8IW52 837 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 PPIL6Q8IXY8 311 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 MRGPRX2Q96LB1 330 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 WDR26Q9H7D7 661 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 EIF2B3Q9NR50 452 aaKnown RBP13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 UBP1Q9NZI7 540 aa13.91□□□□□ -0.18
SPTLC2-202ENST00000554365 PRSS38A1L453 326 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 RHPN2P1A8MT19 583 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 TERTO14746 1132 aaKnown RBP13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 TNFRSF10CO14798 259 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SUV39H1O43463 412 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SUN1O94901 812 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 AP2A1O95782 977 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 MYBL2P10244 700 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 CCL4P13236 92 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 ALDH4A1P30038 563 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SCNN1BP51168 640 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 GEMP55040 296 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 OR1D5P58170 312 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 VSNL1P62760 191 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 POLR2LP62875 67 aaKnown RBP13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 B4GALNT1Q00973 533 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SPARCL1Q14515 664 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 RALGPS1Q5JS13 557 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 WDR93Q6P2C0 686 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 PNCKQ6P2M8 343 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 DPPA4Q7L190 304 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 HOOK3Q86VS8 718 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 DTX1Q86Y01 620 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 PELI3Q8N2H9 469 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 RCBTB1Q8NDN9 531 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 FBXO25Q8TCJ0 367 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 TRIB3Q96RU7 358 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 NUDT22Q9BRQ3 303 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 FAM114A2Q9NRY5 505 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SPATS2LQ9NUQ6 558 aaKnown RBP13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 FAM153AQ9UHL3 310 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 RAB21Q9UL25 225 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SHOC2Q9UQ13 582 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 SCN8AQ9UQD0 1980 aa13.9□□□□□ -0.18
SPTLC2-202ENST00000554365 MAST4O15021 2626 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 HECTD1Q9ULT8 2610 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 B4GAT1O43505 415 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 PPFIA2O75334 1257 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 PMPCBO75439 489 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 ANXA9O76027 345 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 CPNE6O95741 557 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 PRLP01236 227 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 APRTP07741 180 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 HOXC4P09017 264 aaPredicted RBP13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 CES1P23141 567 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 CD82P27701 267 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 TRIM23P36406 574 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 GRIA1P42261 906 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 WNT3AP56704 352 aa13.89□□□□□ -0.19
SPTLC2-202ENST00000554365 AP1S1P61966 158 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms