RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NDUFAF2Q8N183 169 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 NXPE1Q8N323 547 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 SLC30A5Q8TAD4 765 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 GRHL3Q8TE85 626 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 PIH1D2Q8WWB5 315 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
PRPF39-204ENST00000553605 LRFN5Q96NI6 719 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF599Q96NL3 588 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 C11orf70Q9BRQ4 267 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 CARD9Q9H257 536 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF552Q9H707 407 aaPredicted RBP13.55□□□□□ -0.24
PRPF39-204ENST00000553605 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 POT1Q9NUX5 634 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 MDC1Q14676 2089 aaKnown RBP13.55□□□□□ -0.24
PRPF39-204ENST00000553605 DNHD1Q96M86 4753 aa13.55□□□□□ -0.24
PRPF39-204ENST00000553605 CCP110O43303 1012 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 CYP1A1P04798 512 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF30P17039 623 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 HTR1EP28566 365 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 HSPA9P38646 679 aaKnown RBP13.54□□□□□ -0.24
PRPF39-204ENST00000553605 STC1P52823 247 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 TUBB4BP68371 445 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 HSD11B2P80365 405 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 TUBB2AQ13885 445 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF630Q2M218 657 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-204ENST00000553605 VWA2Q5GFL6 755 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 RAB43Q86YS6 212 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 RBM12BQ8IXT5 1001 aaKnown RBP13.54□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF295-AS1Q8N0V1 137 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 PGBD5Q8N414 524 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 GALNT16Q8N428 558 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 CLEC1AQ8NC01 280 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 FAR1Q8WVX9 515 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 ITLN2Q8WWU7 325 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-204ENST00000553605 RELTQ969Z4 430 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 FER1L6-AS2Q96M78 137 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 SMIM14Q96QK8 99 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 MAP3K3Q99759 626 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 TUBB2BQ9BVA1 445 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 SELENOOQ9BVL4 669 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 ZBTB20Q9HC78 741 aaPredicted RBP13.54□□□□□ -0.24
PRPF39-204ENST00000553605 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 ABCA2Q9BZC7 2435 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 PIKFYVEQ9Y2I7 2098 aa13.54□□□□□ -0.24
PRPF39-204ENST00000553605 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 EEF2KO00418 725 aaKnown RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 DAPK3O43293 454 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 CAPN1P07384 714 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 PDHA1P08559 390 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF8P17098 575 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 CAPN3P20807 821 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 GPR19Q15760 415 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 SEPT7Q16181 437 aaKnown RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 ABRAXAS1Q6UWZ7 409 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 BNC2Q6ZN30 1099 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 MMP21Q8N119 569 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 D2HGDHQ8N465 521 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 OR8K5Q8NH50 307 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 EPS8L1Q8TE68 723 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 CPT1BQ92523 772 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 SNX21Q969T3 373 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 ZNF501Q96CX3 271 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 HDAC11Q96DB2 347 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 CXorf40BQ96DE9 158 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
PRPF39-204ENST00000553605 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 SLC23A2Q9UGH3 650 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 PKDREJQ9NTG1 2253 aa13.53□□□□□ -0.24
PRPF39-204ENST00000553605 A0A0J9YYE9 177 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 OR52A4PA6NMU1 304 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 FADS2P1A8MWK0 482 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 MTA2O94776 668 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 TRBC1P01850 177 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 BRAFP15056 766 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 ERCC2P18074 760 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 SSTR2P30874 369 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 OTX2P32243 289 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF143P52747 638 aaPredicted RBP13.52□□□□□ -0.25
PRPF39-204ENST00000553605 KRTAP10-9P60411 292 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 MAXP61244 160 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 INSCQ1MX18 579 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 TDRD12Q587J7 1177 aaKnown RBP13.52□□□□□ -0.25
PRPF39-204ENST00000553605 RALGPS1Q5JS13 557 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 DCAF10Q5QP82 559 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 PRAMEF17Q5VTA0 474 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 CDH24Q86UP0 819 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 ZNF677Q86XU0 584 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 RAVER1Q8IY67 606 aaKnown RBP13.52□□□□□ -0.25
PRPF39-204ENST00000553605 TTC30BQ8N4P2 665 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 NPWQ8N729 165 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 SLC20A1Q8WUM9 679 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 CLIP3Q96DZ5 547 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 TIGD1Q96MW7 591 aa13.52□□□□□ -0.25
PRPF39-204ENST00000553605 IP6K3Q96PC2 410 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms