RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ABI3BPQ7Z7G0 1075 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 ZNF575Q86XF7 245 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 TMPRSS6Q8IU80 811 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 TBC1D3Q8IZP1 549 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 ZNF808Q8N4W9 903 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 PDPRQ8NCN5 879 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 C11orf65Q8NCR3 313 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 STEAP2Q8NFT2 490 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 SYN2Q92777 582 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 NECTIN4Q96NY8 510 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 IFIH1Q9BYX4 1025 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 NUAK2Q9H093 628 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PDZD7Q9H5P4 517 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 CNOT10Q9H9A5 744 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 GPN1Q9HCN4 374 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 KCNK9Q9NPC2 374 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 IL23AQ9NPF7 189 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 TRIM10Q9UDY6 481 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 HAO1Q9UJM8 370 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 SHOC2Q9UQ13 582 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 UBE2J1Q9Y385 318 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 COPG1Q9Y678 874 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 LAMC3Q9Y6N6 1575 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 A0A1W2PR77 199 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PSMD9O00233 223 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 DCLK1O15075 740 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 TTI1O43156 1089 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 MED7O43513 233 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PLRG1O43660 514 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 SSX5O60225 188 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 RANBP6O60518 1105 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 CIDEAO60543 219 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 SURF6O75683 361 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 POP4O95707 220 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 CHRM4P08173 479 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PEPDP12955 493 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 LYL1P12980 280 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 CALB2P22676 271 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PTPN6P29350 595 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 BMI1P35226 326 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 SLC16A2P36021 539 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 GSTM5P46439 218 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 MTNR1AP48039 350 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 TOB1P50616 345 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 SUOXP51687 545 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PGDP52209 483 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PDZK1IP1Q13113 114 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 GIT2Q14161 759 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 CNGA3Q16281 694 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 BMT2Q1RMZ1 405 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PTCHD3Q3KNS1 767 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 CBWD6Q4V339 395 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 CBWD3Q5JTY5 395 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 ATG9BQ674R7 924 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 OLFML1Q6UWY5 402 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 C11orf57Q6ZUT1 292 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 GSTA5Q7RTV2 222 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 EXOC3L1Q86VI1 746 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 WDR5BQ86VZ2 330 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 FAM9CQ8IZT9 166 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 TRIML2Q8N7C3 387 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 DNAJB14Q8TBM8 379 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 ROBO4Q8WZ75 1007 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PPP2R3CQ969Q6 453 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 IFT74Q96LB3 600 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 SLC46A1Q96NT5 459 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 EIF3CQ99613 913 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 TTYH3Q9C0H2 523 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 EPC1Q9H2F5 836 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PARVGQ9HBI0 331 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 AGPAT5Q9NUQ2 364 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 FBXO28Q9NVF7 368 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 PRMT7Q9NVM4 692 aaPredicted RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 ABI3Q9P2A4 366 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 KCNN3Q9UGI6 736 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 DDX25Q9UHL0 483 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 FBXW11Q9UKB1 542 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 EXOC6BQ9Y2D4 811 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 STK38LQ9Y2H1 464 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 WBP11Q9Y2W2 641 aaKnown RBP4.18□□□□□ -1.74
USP44-208ENST00000552440 MAB21L2Q9Y586 359 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 COMMD3-BMI1R4GMX3 469 aa4.18□□□□□ -1.74
USP44-208ENST00000552440 KIF7Q2M1P5 1343 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 ZCCHC6Q5VYS8 1495 aaKnown RBP4.17□□□□□ -1.74
USP44-208ENST00000552440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.17□□□□□ -1.74
USP44-208ENST00000552440 LNP1A1A4G5 178 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 C5orf52A6NGY3 159 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 NPIPB13A6NJU9 1138 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 SDR42E2A6NKP2 422 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 ZNF716A6NP11 495 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 NPIPB4C9JG80 1138 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 AGPSO00116 658 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 MATN2O00339 956 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 DNALI1O14645 258 aaPredicted RBP4.17□□□□□ -1.74
USP44-208ENST00000552440 MEIS2O14770 477 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 NVLO15381 856 aaKnown RBP4.17□□□□□ -1.74
USP44-208ENST00000552440 HOXA3O43365 443 aaPredicted RBP4.17□□□□□ -1.74
USP44-208ENST00000552440 HCRTR2O43614 444 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 CTAG2O75638 210 aa4.17□□□□□ -1.74
USP44-208ENST00000552440 KAT7O95251 611 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms